SCOPe 2.05: Domain d1gpja2: 1gpj A:144-302

Lineage for d1gpja2 (1gpj A:144-302)

1. Root: SCOPe 2.05

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.2: NAD(P)-binding Rossmann-fold domains [51734] (1 superfamily)
   core: 3 layers, a/b/a; parallel beta-sheet of 6 strands, order 321456
   The nucleotide-binding modes of this and the next two folds/superfamilies are similar

4. Superfamily c.2.1: NAD(P)-binding Rossmann-fold domains [51735] (13 families)

5. Family c.2.1.7: Aminoacid dehydrogenase-like, C-terminal domain [51883] (12 proteins)
   extra N-terminal helix displaces the C-terminal helix (following strand 6) from its usual position creating a family nicotineamide-binding site

6. Protein Glutamyl tRNA-reductase middle domain [69413] (1 species)
   other domains of this protein are distinct from those usually associated with the family domain

7. Species Methanopyrus kandleri [TaxId:2320] [69414] (1 PDB entry)

8. Domain d1gpja2: 1gpj A:144-302 [65452]
   Other proteins in same PDB: d1gpja1, d1gpja3
   complexed with cit, glu, gmc

Details for d1gpja2

PDB Entry: 1gpj, 1.95 Å

PDB Description: glutamyl-trna reductase from methanopyrus kandleri

PDB Compounds: (A:) glutamyl-tRNA reductase

SCOPe Domain Sequences for d1gpja2:

Sequence; same for both SEQRES and ATOM records:

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Methanopyrus kandleri [TaxId: 2320]}
segavsigsaavelaerelgslhdktvlvvgagemgktvakslvdrgvravlvanrtyer
avelardlggeavrfdelvdhlarsdvvvsataaphpvihvddvrealrkrdrrspilii
dianprdveegveniedvevrtiddlrviarenlerrrk

Timeline for d1gpja2:

• d1gpja2 first appeared in SCOP 1.59
  
• d1gpja2 appears in SCOPe 2.04
  
• d1gpja2 appears in SCOPe 2.06
  
• d1gpja2 appears in the current release, SCOPe 2.08