Lineage for d1gkub2 (1gku B:251-498)

  1. Root: SCOP 1.67
  2. 383641Class c: Alpha and beta proteins (a/b) [51349] (130 folds)
  3. 393331Fold c.37: P-loop containing nucleoside triphosphate hydrolases [52539] (1 superfamily)
    3 layers: a/b/a, parallel or mixed beta-sheets of variable sizes
  4. 393332Superfamily c.37.1: P-loop containing nucleoside triphosphate hydrolases [52540] (22 families) (S)
    division into families based on beta-sheet topologies
  5. 394860Family c.37.1.16: Helicase-like "domain" of reverse gyrase [69496] (1 protein)
  6. 394861Protein Helicase-like "domain" of reverse gyrase [69497] (1 species)
    contains a mobile insertion of LEM/SAP-like HeH motif, residues 354-423
  7. 394862Species Archaeon Archaeoglobus fulgidus [TaxId:2234] [69498] (2 PDB entries)
  8. 394864Domain d1gkub2: 1gku B:251-498 [65258]
    Other proteins in same PDB: d1gkub3
    less ordered regions are modeled as poly-ALA
    mutant

Details for d1gkub2

PDB Entry: 1gku (more details), 2.7 Å

PDB Description: reverse gyrase from archaeoglobus fulgidus

SCOP Domain Sequences for d1gkub2:

Sequence, based on SEQRES records: (download)

>d1gkub2 c.37.1.16 (B:251-498) Helicase-like "domain" of reverse gyrase {Archaeon Archaeoglobus fulgidus}
vrnvedvavndesistlssileklgtggiiyartgeeaeeiyeslknkfrigivtatkkg
dyekfvegeidhligtahyygtlvrgldlperirfavfvgcpsfrvtiedidslspqmvk
llaylyrnvdeierllpaverhidevreilkkvmgkerpqakdvvvregevifpdlrtyi
qgsgrtsrlfaggltkgasflleddsellsafieraklydiefksidevdfeklsrelde
srdryrrr

Sequence, based on observed residues (ATOM records): (download)

>d1gkub2 c.37.1.16 (B:251-498) Helicase-like "domain" of reverse gyrase {Archaeon Archaeoglobus fulgidus}
vrnvedvavndesistlssileklgtggiiyartgeeaeeiyeslknkfrigivtatkkg
dyekfvegeidhligtahrgldlperirfavfvgcpsfrvtiedidslspqmvkllayly
rnvdeierllpaverhidevreilkkvmgkerpqakdvvvregevifpdlrtyiqgsgrt
srlfaggltkgasflleddsellsafieraklydiefksidevdfeklsreldesrdryr
rr

SCOP Domain Coordinates for d1gkub2:

Click to download the PDB-style file with coordinates for d1gkub2.
(The format of our PDB-style files is described here.)

Timeline for d1gkub2: