SCOPe 2.04: Domain d1gkub1: 1gku B:1-250

Lineage for d1gkub1 (1gku B:1-250)

1. Root: SCOPe 2.04

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.37: P-loop containing nucleoside triphosphate hydrolases [52539] (1 superfamily)
   3 layers: a/b/a, parallel or mixed beta-sheets of variable sizes

4. Superfamily c.37.1: P-loop containing nucleoside triphosphate hydrolases [52540] (25 families)
   division into families based on beta-sheet topologies

5. Family c.37.1.16: Helicase-like "domain" of reverse gyrase [69496] (1 protein)

6. Protein Helicase-like "domain" of reverse gyrase [69497] (1 species)
   contains a mobile insertion of LEM/SAP-like HeH motif, residues 354-423

7. Species Archaeoglobus fulgidus [TaxId:2234] [69498] (2 PDB entries)

8. Domain d1gkub1: 1gku B:1-250 [65257]
   Other proteins in same PDB: d1gkub3
   less ordered regions are modeled as poly-ALA

Details for d1gkub1

PDB Entry: 1gku, 2.7 Å

PDB Description: reverse gyrase from archaeoglobus fulgidus

PDB Compounds: (B:) reverse gyrase

SCOPe Domain Sequences for d1gkub1:

Sequence; same for both SEQRES and ATOM records:

>d1gkub1 c.37.1.16 (B:1-250) Helicase-like "domain" of reverse gyrase {Archaeoglobus fulgidus [TaxId: 2234]}
aaaaaaaaaaaaaaaaaaaslclfpedfllkefveffrkcvgepraiqkmwakrilrkes
faataptgvgktsfglamslflalkgkrcyvifptsllviqaaetirkyaekagvgtenl
igyyhgripkrekenfmqnlrnfkivitttqflskhyrelghfdfifvddvdailkaskn
vdkllhllgfhydlktkswvgeargclmvstatakkgkkaelfrqllnfdigssrit

Timeline for d1gkub1:

• d1gkub1 first appeared in SCOP 1.59
  
• d1gkub1 appears in SCOPe 2.03
  
• d1gkub1 appears in SCOPe 2.05
  
• d1gkub1 appears in the current release, SCOPe 2.08