SCOP 1.63: Domain d1gkub1: 1gku B:1-250

Lineage for d1gkub1 (1gku B:1-250)

1. Root: SCOP 1.63

2. Class c: Alpha and beta proteins (a/b) [51349] (117 folds)

3. Fold c.37: P-loop containing nucleotide triphosphate hydrolases [52539] (1 superfamily)
   3 layers: a/b/a, parallel or mixed beta-sheets of variable sizes

4. Superfamily c.37.1: P-loop containing nucleotide triphosphate hydrolases [52540] (20 families)
   division into families based on beta-sheet topologies

5. Family c.37.1.16: Helicase-like "domain" of reverse gyrase [69496] (1 protein)

6. Protein Helicase-like "domain" of reverse gyrase [69497] (1 species)
   contains a mobile insertion of LEM/SAP-like HeH motif, residues 354-423

7. Species Archaeon Archaeoglobus fulgidus [TaxId:2234] [69498] (2 PDB entries)

8. Domain d1gkub1: 1gku B:1-250 [65257]
   Other proteins in same PDB: d1gkub3

Details for d1gkub1

PDB Entry: 1gku, 2.7 Å

PDB Description: reverse gyrase from archaeoglobus fulgidus

SCOP Domain Sequences for d1gkub1:

Sequence, based on SEQRES records:

>d1gkub1 c.37.1.16 (B:1-250) Helicase-like "domain" of reverse gyrase {Archaeon Archaeoglobus fulgidus}
aaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaslclfpedfllkefveffrkcvgeprai
qkmwakrilrkesfaataptgvgktsfglamslflalkgkrcyvifptsllviqaaetir
kyaekagvgtenligyyhgripkrekenfmqnlrnfkivitttqflskhyrelghfdfif
vddvdailkasknvdkllhllgfhydlktkswvgeargclmvstatakkgkkaelfrqll
nfdigssrit

Sequence, based on observed residues (ATOM records):

>d1gkub1 c.37.1.16 (B:1-250) Helicase-like "domain" of reverse gyrase {Archaeon Archaeoglobus fulgidus}
aaaaaaaaaaaaaaaaaaaslclfpedfllkefveffrkcvgepraiqkmwakrilrkes
faataptgvgktsfglamslflalkgkrcyvifptsllviqaaetirkyaekagvgtenl
igyyhgripkrekenfmqnlrnfkivitttqflskhyrelghfdfifvddvdailkaskn
vdkllhllgfhydlktkswvgeargclmvstatakkgkkaelfrqllnfdigssrit

Timeline for d1gkub1:

• d1gkub1 first appeared in SCOP 1.59
  
• d1gkub1 appears in SCOP 1.61
  
• d1gkub1 appears in SCOP 1.65
  
• d1gkub1 appears in the current release, SCOPe 2.08