Lineage for d1gehe1 (1geh E:137-443)

  1. Root: SCOP 1.67
  2. 383641Class c: Alpha and beta proteins (a/b) [51349] (130 folds)
  3. 383642Fold c.1: TIM beta/alpha-barrel [51350] (28 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 386354Superfamily c.1.14: RuBisCo, C-terminal domain [51649] (1 family) (S)
  5. 386355Family c.1.14.1: RuBisCo, large subunit, C-terminal domain [51650] (1 protein)
    N-terminal domain is alpha+beta
  6. 386356Protein Ribulose 1,5-bisphosphate carboxylase-oxygenase [51651] (8 species)
  7. 386362Species Archaeon Thermococcus kodakaraensis [TaxId:311400] [69404] (1 PDB entry)
  8. 386367Domain d1gehe1: 1geh E:137-443 [65189]
    Other proteins in same PDB: d1geha2, d1gehb2, d1gehc2, d1gehd2, d1gehe2
    complexed with so4

Details for d1gehe1

PDB Entry: 1geh (more details), 2.8 Å

PDB Description: crystal structure of archaeal rubisco (ribulose 1,5-bisphosphate carboxylase/oxygenase)

SCOP Domain Sequences for d1gehe1:

Sequence, based on SEQRES records: (download)

>d1gehe1 c.1.14.1 (E:137-443) Ribulose 1,5-bisphosphate carboxylase-oxygenase {Archaeon Thermococcus kodakaraensis}
dgpafgiegvrkmleikdrpiygvvpkpkvgyspeefeklaydllsngadymkddenlts
pwynrfeeraeimakiidkvenetgekktwfanitadllemeqrlevladlglkhamvdv
vitgwgalryirdlaadyglaihghramhaaftrnpyhgismfvlaklyrligidqlhvg
tagagkleggkwdviqnarilreshykpdendvfhleqkfysikaafptssgglhpgniq
pviealgtdivlqlgggtlghpdgpaagaravrqaidaimqgipldeyakthkelarale
kwghvtp

Sequence, based on observed residues (ATOM records): (download)

>d1gehe1 c.1.14.1 (E:137-443) Ribulose 1,5-bisphosphate carboxylase-oxygenase {Archaeon Thermococcus kodakaraensis}
dgpafgiegvrkmleikdrpiygvvpkpkvgyspeefeklaydllsngadymkddenlts
pwynrfeeraeimakiidkvenetgekktwfanitadllemeqrlevladlglkhamvdv
vitgwgalryirdlaadyglaihghramhaaftrnpyhgismfvlaklyrligidqlhvg
taeggkwdviqnarilreshykpdendvfhleqkfysikaafptssgglhpgniqpviea
lgtdivlqlgggtlghpdgpaagaravrqaidaimqgipldeyakthkelaralekwghv
tp

SCOP Domain Coordinates for d1gehe1:

Click to download the PDB-style file with coordinates for d1gehe1.
(The format of our PDB-style files is described here.)

Timeline for d1gehe1: