SCOP 1.75: Domain d1gehc1: 1geh C:137-443

Lineage for d1gehc1 (1geh C:137-443)

1. Root: SCOP 1.75

2. Class c: Alpha and beta proteins (a/b) [51349] (147 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.14: RuBisCo, C-terminal domain [51649] (1 family)

5. Family c.1.14.1: RuBisCo, large subunit, C-terminal domain [51650] (1 protein)
   N-terminal domain is alpha+beta

6. Protein Ribulose 1,5-bisphosphate carboxylase-oxygenase [51651] (12 species)

7. Species Archaeon Thermococcus kodakaraensis [TaxId:311400] [69404] (1 PDB entry)

8. Domain d1gehc1: 1geh C:137-443 [65185]
   Other proteins in same PDB: d1geha2, d1gehb2, d1gehc2, d1gehd2, d1gehe2

Details for d1gehc1

PDB Entry: 1geh, 2.8 Å

PDB Description: crystal structure of archaeal rubisco (ribulose 1,5-bisphosphate carboxylase/oxygenase)

PDB Compounds: (C:) ribulose-1,5-bisphosphate carboxylase/oxygenase

SCOP Domain Sequences for d1gehc1:

Sequence, based on SEQRES records:

>d1gehc1 c.1.14.1 (C:137-443) Ribulose 1,5-bisphosphate carboxylase-oxygenase {Archaeon Thermococcus kodakaraensis [TaxId: 311400]}
dgpafgiegvrkmleikdrpiygvvpkpkvgyspeefeklaydllsngadymkddenlts
pwynrfeeraeimakiidkvenetgekktwfanitadllemeqrlevladlglkhamvdv
vitgwgalryirdlaadyglaihghramhaaftrnpyhgismfvlaklyrligidqlhvg
tagagkleggkwdviqnarilreshykpdendvfhleqkfysikaafptssgglhpgniq
pviealgtdivlqlgggtlghpdgpaagaravrqaidaimqgipldeyakthkelarale
kwghvtp

Sequence, based on observed residues (ATOM records):

>d1gehc1 c.1.14.1 (C:137-443) Ribulose 1,5-bisphosphate carboxylase-oxygenase {Archaeon Thermococcus kodakaraensis [TaxId: 311400]}
dgpafgiegvrkmleikdrpiygvvpkpkvgyspeefeklaydllsngadymkddenlts
pwynrfeeraeimakiidkvenetgekktwfanitadllemeqrlevladlglkhamvdv
vitgwgalryirdlaadyglaihghramhaaftrnpyhgismfvlaklyrligidqlhvg
taeggkwdviqnarilreshykpdendvfhleqkfysikaafptssgglhpgniqpviea
lgtdivlqlgggtlghpdgpaagaravrqaidaimqgipldeyakthkelaralekwghv
tp

Timeline for d1gehc1:

• d1gehc1 first appeared in SCOP 1.59
  
• d1gehc1 appears in SCOP 1.73
  
• d1gehc1 appears in SCOPe 2.01
  
• d1gehc1 appears in the current release, SCOPe 2.08