SCOPe 2.08: Domain d1g5gd2: 1g5g D:67-223

Lineage for d1g5gd2 (1g5g D:67-223)

1. Root: SCOPe 2.08

2. Class h: Coiled coil proteins [57942] (7 folds)

3. Fold h.3: Stalk segment of viral fusion proteins [58063] (3 superfamilies)
   core: trimeric coiled coil

4. Superfamily h.3.2: Virus ectodomain [58069] (2 families)

5. Family h.3.2.1: Virus ectodomain [58070] (9 proteins)

6. Protein Stalk of the ectodomain of NDV fusion glycoprotein [69983] (1 species)

7. Species Newcastle disease virus [TaxId:11176] [69984] (1 PDB entry)

8. Domain d1g5gd2: 1g5g D:67-223 [65162]
   Other proteins in same PDB: d1g5ga1, d1g5gb1, d1g5gc1, d1g5gd1, d1g5ge1, d1g5gf1
   complexed with nag

Details for d1g5gd2

PDB Entry: 1g5g, 3.3 Å

PDB Description: fragment of fusion protein from newcastle disease virus

PDB Compounds: (D:) Fusion protein

SCOPe Domain Sequences for d1g5gd2:

Sequence, based on SEQRES records:

>d1g5gd2 h.3.2.1 (D:67-223) Stalk of the ectodomain of NDV fusion glycoprotein {Newcastle disease virus [TaxId: 11176]}
pnmpkdkeacakapleaynrtlttlltplgdsirriqesvttsgggkqgrligaiiggva
lgvataaqitaasaliqanqnaanilrlkesiaatneavhevtnglsqlavavgkmqqfv
ndqfnktaqeldcikitqqvgvelnlyltelttvfgp

Sequence, based on observed residues (ATOM records):

>d1g5gd2 h.3.2.1 (D:67-223) Stalk of the ectodomain of NDV fusion glycoprotein {Newcastle disease virus [TaxId: 11176]}
pnmpkdkeacakapleaynrtlttlltplgdsirriqesglsqlavavgkmqqfvndqfn
ktaqeldcikitqqvgvelnlyltelttvfgp

Timeline for d1g5gd2:

• d1g5gd2 first appeared in SCOP 1.59
  
• d1g5gd2 appears in SCOPe 2.07