SCOPe 2.08: Domain d1e9re_: 1e9r E:

Lineage for d1e9re_ (1e9r E:)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.37: P-loop containing nucleoside triphosphate hydrolases [52539] (1 superfamily)
   3 layers: a/b/a, parallel or mixed beta-sheets of variable sizes

4. Superfamily c.37.1: P-loop containing nucleoside triphosphate hydrolases [52540] (27 families)
   division into families based on beta-sheet topologies

5. Family c.37.1.11: RecA protein-like (ATPase-domain) [52670] (22 proteins)
   core: mixed beta-sheet of 8 strands, order 32451678; strand 7 is antiparallel to the rest

6. Protein Bacterial conjugative coupling protein TrwB [69492] (1 species)

7. Species Escherichia coli [TaxId:562] [69493] (5 PDB entries)

8. Domain d1e9re_: 1e9r E: [64830]
   complexed with so4
   has additional subdomain(s) that are not in the common domain

Details for d1e9re_

PDB Entry: 1e9r, 2.4 Å

PDB Description: bacterial conjugative coupling protein trwbdeltan70. trigonal form in complex with sulphate.

PDB Compounds: (E:) conjugal transfer protein trwb

SCOPe Domain Sequences for d1e9re_:

Sequence, based on SEQRES records:

>d1e9re_ c.37.1.11 (E:) Bacterial conjugative coupling protein TrwB {Escherichia coli [TaxId: 562]}
gqgefggapfkrflrgtrivsggklkrmtrekakqvtvagvpmprdaeprhllvngatgt
gksvllrelaytgllrgdrmvivdpngdmlskfgrdkdiilnpydqrtkgwsffneirnd
ydwqryalsvvprgktdeaeewasygrlllretakklaligtpsmrelfhwttiatfddl
rgflegtlaeslfagsneaskaltsarfvlsdklpehvtmpdgdfsirswledpnggnlf
itwredmgpalrplisawvdvvctsilslpeepkrrlwlfidelasleklasladaltkg
rkaglrvvaglqstsqlddvygvkeaqtlrasfrslvvlggsrtdpktnedmslslgehe
verdryskntgkhhstgralervrervvmpaeianlpdltayvgfagnrpiakvpleikq
fanrqpafvegt

Sequence, based on observed residues (ATOM records):

>d1e9re_ c.37.1.11 (E:) Bacterial conjugative coupling protein TrwB {Escherichia coli [TaxId: 562]}
gqgefggapfkrflrgtrivsggklkrmtrekakqvtvagvpmprdaeprhllvngatgt
gksvllrelaytgllrgdrmvivdpngdmlskfgrdkdiilnpydqrtkgwsffneirnd
ydwqryalsvvprgktdeaeewasygrlllretakklaligtpsmrelfhwttiatfddl
rgflegtlaeslfagsneaskaltsarfvlsdklpehvtmpdgdfsirswledpnggnlf
itwredmgpalrplisawvdvvctsilslpeepkrrlwlfidelasleklasladaltkg
rkaglrvvaglqstsqlddvygvkeaqtlrasfrslvvlggsrtdpktnedmslslgehe
verdralervrervvmpaeianlpdltayvgfagnrpiakvpleikqfanrqpafvegt

Timeline for d1e9re_:

• d1e9re_ first appeared in SCOP 1.59
  
• d1e9re_ appears in SCOPe 2.07