Lineage for Species: Thermus aquaticus [TaxId: 271]

  1. Root: SCOPe 2.06
  2. 2170735Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2237535Fold d.181: Insert subdomain of RNA polymerase alpha subunit [56552] (1 superfamily)
    unusual fold; contains a left-handed beta-alpha-beta unit
  4. 2237536Superfamily d.181.1: Insert subdomain of RNA polymerase alpha subunit [56553] (1 family) (S)
    automatically mapped to Pfam PF01000
  5. 2237537Family d.181.1.1: Insert subdomain of RNA polymerase alpha subunit [56554] (2 proteins)
  6. 2237538Protein RNA polymerase alpha subunit [56555] (3 species)
  7. 2237544Species Thermus aquaticus [TaxId:271] [64461] (4 PDB entries)

PDB entries in Species: Thermus aquaticus [TaxId: 271]:

  1. Domain(s) for 1i6v:
    1. 2237549Domain d1i6va2: 1i6v A:50-172 [61853]
      Other proteins in same PDB: d1i6va1, d1i6vb1, d1i6vc_, d1i6vd_, d1i6ve_
      protein/DNA complex; protein/RNA complex; complexed with mg, rfp, zn
    2. 2237550Domain d1i6vb2: 1i6v B:50-172 [61855]
      Other proteins in same PDB: d1i6va1, d1i6vb1, d1i6vc_, d1i6vd_, d1i6ve_
      protein/DNA complex; protein/RNA complex; complexed with mg, rfp, zn
  2. Domain(s) for 1ynj:
    1. 2237545Domain d1ynja2: 1ynj A:50-172 [123738]
      Other proteins in same PDB: d1ynja1, d1ynjb1, d1ynjc1, d1ynjd1, d1ynjk1
      automatically matched to d1i6va2
      protein/RNA complex; complexed with srn, zn
    2. 2237546Domain d1ynjb2: 1ynj B:50-172 [123740]
      Other proteins in same PDB: d1ynja1, d1ynjb1, d1ynjc1, d1ynjd1, d1ynjk1
      automatically matched to d1i6va2
      protein/RNA complex; complexed with srn, zn
  3. Domain(s) for 1ynn:
    1. 2237547Domain d1ynna2: 1ynn A:50-172 [123743]
      Other proteins in same PDB: d1ynna1, d1ynnb1, d1ynnc1, d1ynnd1, d1ynnk1
      automatically matched to d1i6va2
      protein/RNA complex; complexed with rfp, zn
    2. 2237548Domain d1ynnb2: 1ynn B:50-172 [123745]
      Other proteins in same PDB: d1ynna1, d1ynnb1, d1ynnc1, d1ynnd1, d1ynnk1
      automatically matched to d1i6va2
      protein/RNA complex; complexed with rfp, zn
  4. Domain(s) for 2gho:
    1. 2237551Domain d2ghoa2: 2gho A:50-172 [135181]
      Other proteins in same PDB: d2ghoa1, d2ghob1, d2ghoc1, d2ghod1
      automatically matched to d1i6va2
      protein/RNA complex
    2. 2237552Domain d2ghob2: 2gho B:50-172 [135183]
      Other proteins in same PDB: d2ghoa1, d2ghob1, d2ghoc1, d2ghod1
      automatically matched to d1i6va2
      protein/RNA complex

More info for Species Thermus aquaticus [TaxId:271] from d.181.1.1 RNA polymerase alpha subunit

Timeline for Species Thermus aquaticus [TaxId:271] from d.181.1.1 RNA polymerase alpha subunit: