Lineage for Protein: 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB

  1. Root: SCOPe 2.07
  2. 2494617Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2536043Fold d.115: YrdC/RibB [55820] (1 superfamily)
    core: alpha-beta(2)-alpha-beta-alpha(2)-beta(2)-alpha-beta-alpha-beta; 3 layers; mixed twisted sheet of 7 strands; order 7126354; strands 7 and 1 are parallel to each other
  4. 2536044Superfamily d.115.1: YrdC/RibB [55821] (3 families) (S)
  5. 2536059Family d.115.1.2: 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB [64372] (2 proteins)
    contains one additional helix in the C-terminal extension
    automatically mapped to Pfam PF00926
  6. 2536060Protein 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB [64373] (4 species)

Species:

  1. 2536061Escherichia coli [TaxId:562] [64374] (3 PDB entries)
    1. Domains for 1g57:
      1. 2536062Domain d1g57a_: 1g57 A: [60253]
        complexed with cs
      2. 2536063Domain d1g57b_: 1g57 B: [60254]
        complexed with cs
    2. Domains for 1g58:
      1. 2536064Domain d1g58a_: 1g58 A: [60255]
        complexed with au
      2. 2536065Domain d1g58b_: 1g58 B: [60256]
        complexed with au
    3. Domain for 1iez:
  2. 2536067Fungus (Magnaporthe grisea) [TaxId:148305] [75533] (5 PDB entries)
    1. Domain for 1k49:
    2. Domain for 1k4i:
    3. Domain for 1k4l:
    4. Domain for 1k4o:
    5. Domain for 1k4p:
  3. 2536073Methanocaldococcus jannaschii [TaxId:2190] [103219] (3 PDB entries)
    Uniprot Q60364
    1. Domains for 1pvw:
      1. 2536078Domain d1pvwa_: 1pvw A: [95192]
        complexed with ca, po4, zn
      2. 2536079Domain d1pvwb_: 1pvw B: [95193]
        complexed with ca, po4, zn
      3. 2536080Domain d1pvwc_: 1pvw C: [95194]
        complexed with ca, po4, zn
    2. Domains for 1pvy:
      1. 2536076Domain d1pvya_: 1pvy A: [95195]
        complexed with 5rp, ca, zn
      2. 2536077Domain d1pvyb_: 1pvy B: [95196]
        complexed with 5rp, ca, zn
    3. Domains for 1snn:
      1. 2536074Domain d1snna_: 1snn A: [105821]
        complexed with 5rp, ca, zn
      2. 2536075Domain d1snnb_: 1snn B: [105822]
        complexed with 5rp, ca, zn
  4. 2536081Yeast (Candida albicans) [TaxId:5476] [111135] (2 PDB entries)
    Uniprot Q5A3V6
    1. Domains for 1tks:
      1. 2536082Domain d1tksa_: 1tks A: [107114]
      2. 2536083Domain d1tksb_: 1tks B: [107115]
    2. Domains for 1tku:
      1. 2536084Domain d1tkua_: 1tku A: [107116]
        complexed with 5rp
      2. 2536085Domain d1tkub_: 1tku B: [107117]
        complexed with 5rp

More info for Protein 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB from d.115.1.2: 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB

Timeline for Protein 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB from d.115.1.2: 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB:

  • Protein 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB from d.115.1.2: 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB first appeared in SCOP 1.57
  • Protein 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB from d.115.1.2: 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB appears in SCOPe 2.06