SCOPe 2.08: Protein: 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB

Lineage for Protein: 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB

Root: SCOPe 2.08
Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

Fold d.115: YrdC/RibB [55820] (1 superfamily)
core: alpha-beta(2)-alpha-beta-alpha(2)-beta(2)-alpha-beta-alpha-beta; 3 layers; mixed twisted sheet of 7 strands; order 7126354; strands 7 and 1 are parallel to each other

Superfamily d.115.1: YrdC/RibB [55821] (3 families)
Family d.115.1.2: 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB [64372] (2 proteins)
contains one additional helix in the C-terminal extension
automatically mapped to Pfam PF00926
Protein 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB [64373] (4 species)

Species:

Escherichia coli [TaxId:562] [64374] (3 PDB entries)
1. Domains for 1g57:
  1. Domain d1g57a_: 1g57 A: [60253]
    complexed with cs
  2. Domain d1g57b_: 1g57 B: [60254]
    complexed with cs
2. Domains for 1g58:
  1. Domain d1g58a_: 1g58 A: [60255]
    complexed with au
  2. Domain d1g58b_: 1g58 B: [60256]
    complexed with au
3. Domain for 1iez:
  - Domain d1ieza_: 1iez A: [66129]
Fungus (Magnaporthe grisea) [TaxId:148305] [75533] (5 PDB entries)
1. Domain for 1k49:
  - Domain d1k49a_: 1k49 A: [72053]
    complexed with so4
2. Domain for 1k4i:
  - Domain d1k4ia_: 1k4i A: [72056]
    complexed with mg, so4
3. Domain for 1k4l:
  - Domain d1k4la_: 1k4l A: [72058]
    complexed with mn, so4
4. Domain for 1k4o:
  - Domain d1k4oa_: 1k4o A: [72060]
    complexed with gol, mn, so4
5. Domain for 1k4p:
  - Domain d1k4pa_: 1k4p A: [72061]
    complexed with so4, zn
Methanocaldococcus jannaschii [TaxId:2190] [103219] (3 PDB entries)
Uniprot Q60364
1. Domains for 1pvw:
  1. Domain d1pvwa_: 1pvw A: [95192]
    complexed with ca, po4, zn
  2. Domain d1pvwb_: 1pvw B: [95193]
    complexed with ca, po4, zn
  3. Domain d1pvwc_: 1pvw C: [95194]
    complexed with ca, po4, zn
2. Domains for 1pvy:
  1. Domain d1pvya_: 1pvy A: [95195]
    complexed with 5rp, ca, zn
  2. Domain d1pvyb_: 1pvy B: [95196]
    complexed with 5rp, ca, zn
3. Domains for 1snn:
  1. Domain d1snna_: 1snn A: [105821]
    complexed with 5rp, ca, zn
  2. Domain d1snnb_: 1snn B: [105822]
    complexed with 5rp, ca, zn
Yeast (Candida albicans) [TaxId:5476] [111135] (2 PDB entries)
Uniprot Q5A3V6
1. Domains for 1tks:
  1. Domain d1tksa_: 1tks A: [107114]
  2. Domain d1tksb_: 1tks B: [107115]
2. Domains for 1tku:
  1. Domain d1tkua_: 1tku A: [107116]
    complexed with 5rp
  2. Domain d1tkub_: 1tku B: [107117]
    complexed with 5rp

More info for Protein 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB from d.115.1.2: 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB

Timeline for Protein 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB from d.115.1.2: 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB:

Protein 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB from d.115.1.2: 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB first appeared in SCOP 1.57
Protein 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB from d.115.1.2: 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB appears in SCOPe 2.07