Lineage for Protein: Isopentenyl diphosphate isomerase

  1. Root: SCOPe 2.08
  2. 2923792Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
  3. 2971307Fold d.113: Nudix [55810] (1 superfamily)
    beta(2)-alpha-beta(3)-alpha; 3 layers: alpha/beta/alpha; mixed sheet
    contains beta-grasp motif
  4. 2971308Superfamily d.113.1: Nudix [55811] (8 families) (S)
  5. 2971664Family d.113.1.2: IPP isomerase-like [64369] (4 proteins)
  6. 2971674Protein Isopentenyl diphosphate isomerase [64370] (2 species)

Species:

  1. 2971675Escherichia coli [TaxId:562] [64371] (18 PDB entries)
    Uniprot Q46822
    1. Domains for 1hx3:
      1. 2971703Domain d1hx3a_: 1hx3 A: [61351]
        Other proteins in same PDB: d1hx3b2
        complexed with imd, mn, so4
      2. 2971704Domain d1hx3b1: 1hx3 B:4-182 [61352]
        Other proteins in same PDB: d1hx3b2
        complexed with imd, mn, so4
    2. Domain for 1hzt:
    3. Domains for 1i9a:
      1. 2971705Domain d1i9aa_: 1i9a A: [62082]
        complexed with mn
      2. 2971706Domain d1i9ab_: 1i9a B: [62083]
        complexed with mn
    4. Domains for 1n2u:
      1. 2971686Domain d1n2ua_: 1n2u A: [302757]
        Other proteins in same PDB: d1n2ub2
        automated match to d1q54a_
        complexed with bhi, mg, mn
      2. 2971687Domain d1n2ub1: 1n2u B:4-182 [302758]
        Other proteins in same PDB: d1n2ub2
        automated match to d1q54b_
        complexed with bhi, mg, mn
    5. Domains for 1nfs:
      1. 2971697Domain d1nfsa_: 1nfs A: [85640]
        Other proteins in same PDB: d1nfsb2
        complexed with ded, mg, mn
      2. 2971698Domain d1nfsb1: 1nfs B:4-182 [85641]
        Other proteins in same PDB: d1nfsb2
        complexed with ded, mg, mn
    6. Domains for 1nfz:
      1. 2971699Domain d1nfza_: 1nfz A: [85658]
        Other proteins in same PDB: d1nfzb2
        complexed with eip, mg, mn
      2. 2971700Domain d1nfzb1: 1nfz B:4-182 [85659]
        Other proteins in same PDB: d1nfzb2
        complexed with eip, mg, mn
    7. Domains for 1ow2:
      1. 2971701Domain d1ow2a_: 1ow2 A: [93626]
        Other proteins in same PDB: d1ow2b2
        complexed with eip, mg, mn; mutant
      2. 2971702Domain d1ow2b1: 1ow2 B:4-182 [93627]
        Other proteins in same PDB: d1ow2b2
        complexed with eip, mg, mn; mutant
    8. Domains for 1ppv:
      1. 2971677Domain d1ppva_: 1ppv A: [104282]
        Other proteins in same PDB: d1ppvb2
        complexed with bhi, mg, mn
      2. 2971678Domain d1ppvb1: 1ppv B:4-182 [104283]
        Other proteins in same PDB: d1ppvb2
        complexed with bhi, mg, mn
    9. Domains for 1ppw:
      1. 2971707Domain d1ppwa_: 1ppw A: [104284]
        Other proteins in same PDB: d1ppwb2
        complexed with eip, mg, mn
      2. 2971708Domain d1ppwb1: 1ppw B:4-182 [104285]
        Other proteins in same PDB: d1ppwb2
        complexed with eip, mg, mn
    10. Domains for 1pvf:
      1. 2971680Domain d1pvfa_: 1pvf A: [104323]
        Other proteins in same PDB: d1pvfb2
        complexed with dpo, mg, mn
      2. 2971681Domain d1pvfb1: 1pvf B:4-182 [104324]
        Other proteins in same PDB: d1pvfb2
        complexed with dpo, mg, mn
    11. Domains for 1q54:
      1. 2971695Domain d1q54a_: 1q54 A: [95860]
        Other proteins in same PDB: d1q54b2
        complexed with bhi, mg, mn
      2. 2971696Domain d1q54b1: 1q54 B:4-182 [95861]
        Other proteins in same PDB: d1q54b2
        complexed with bhi, mg, mn
    12. Domain for 1r67:
    13. Domains for 1x83:
      1. 2971684Domain d1x83a1: 1x83 A:4-179 [121793]
        Other proteins in same PDB: d1x83b3
        complexed with mg, mn, sbh
      2. 2971685Domain d1x83b2: 1x83 B:4-182 [121794]
        Other proteins in same PDB: d1x83b3
        automated match to d1nfsb_
        complexed with mg, mn, sbh
    14. Domains for 1x84:
      1. 2971682Domain d1x84a_: 1x84 A: [121795]
        Other proteins in same PDB: d1x84b3
        automated match to d1nfsb_
        complexed with mg, mn, sbh
      2. 2971683Domain d1x84b2: 1x84 B:4-182 [121796]
        Other proteins in same PDB: d1x84b3
        automated match to d1nfsb_
        complexed with mg, mn, sbh
    15. Domain for 2veh:
    16. Domains for 2vej:
      1. 2971693Domain d2veja_: 2vej A: [304536]
        Other proteins in same PDB: d2vejb2
        automated match to d1ppva_
        complexed with mn
      2. 2971694Domain d2vejb1: 2vej B:4-182 [408210]
        Other proteins in same PDB: d2vejb2
        automated match to d1nfsa_
        complexed with mn
    17. Domains for 2vnp:
      1. 2971688Domain d2vnpa_: 2vnp A: [153339]
        Other proteins in same PDB: d2vnpb3
        automated match to d1nfsb_
        complexed with ded, mg, mn
      2. 2971689Domain d2vnpb2: 2vnp B:4-182 [153340]
        Other proteins in same PDB: d2vnpb3
        automated match to d1nfsb_
        complexed with ded, mg, mn
    18. Domains for 2vnq:
      1. 2971690Domain d2vnqa_: 2vnq A: [153341]
        Other proteins in same PDB: d2vnqb3
        automated match to d1nfsb_
        complexed with imd, mn, so4
      2. 2971691Domain d2vnqb2: 2vnq B:4-182 [153342]
        Other proteins in same PDB: d2vnqb3
        automated match to d1nfsb_
        complexed with imd, mn, so4
  2. 2971709Salmonella enterica [TaxId:99287] [188949] (1 PDB entry)

More info for Protein Isopentenyl diphosphate isomerase from d.113.1.2: IPP isomerase-like

Timeline for Protein Isopentenyl diphosphate isomerase from d.113.1.2: IPP isomerase-like: