SCOPe 2.06: Family d.113.1.2: IPP isomerase-like

Lineage for Family d.113.1.2: IPP isomerase-like

1. Root: SCOPe 2.06

2. Class d: Alpha and beta proteins (a+b) [53931] (385 folds)

3. Fold d.113: Nudix [55810] (1 superfamily)
   beta(2)-alpha-beta(3)-alpha; 3 layers: alpha/beta/alpha; mixed sheet
   contains beta-grasp motif

4. Superfamily d.113.1: Nudix [55811] (8 families)

5. Family d.113.1.2: IPP isomerase-like [64369] (4 proteins)

Proteins:

1. Hypothetical protein DR0079 [103217] (2 species)

   1. Species Deinococcus radiodurans str. R1 (Deinococcus radiodurans R1) [TaxId:243230] [160692] (1 PDB entry)

   2. Species Deinococcus radiodurans [TaxId:1299] [103218] (1 PDB entry)

2. Hypothetical protein YfcD [143770] (1 species)

   • Species Escherichia coli [TaxId:562] [143771] (1 PDB entry)
     Uniprot P65556 8-168

3. Isopentenyl diphosphate isomerase [64370] (2 species)

   1. Species Escherichia coli [TaxId:562] [64371] (18 PDB entries)
      Uniprot Q46822

   2. Species Salmonella enterica [TaxId:99287] [188949] (1 PDB entry)

4. automated matches [190207] (2 species)
   not a true protein

   1. Species Escherichia coli K-12 [TaxId:83333] [187715] (1 PDB entry)

   2. Species Escherichia coli [TaxId:562] [186960] (3 PDB entries)

More info for Family d.113.1.2: IPP isomerase-like

Timeline for Family d.113.1.2: IPP isomerase-like:

• Family d.113.1.2: IPP isomerase-like first appeared in SCOP 1.57, called Family d.113.1.2: Isopentenyl diphosphate isomerase
  
• Family d.113.1.2: IPP isomerase-like appears in SCOPe 2.05
  
• Family d.113.1.2: IPP isomerase-like appears in SCOPe 2.07
  
• Family d.113.1.2: IPP isomerase-like appears in the current release, SCOPe 2.08