SCOPe 2.01: Protein: Methionine gamma-lyase, MGL

Lineage for Protein: Methionine gamma-lyase, MGL

Root: SCOPe 2.01
Class c: Alpha and beta proteins (a/b) [51349] (147 folds)
Fold c.67: PLP-dependent transferase-like [53382] (3 superfamilies)
main domain: 3 layers: a/b/a, mixed beta-sheet of 7 strands, order 3245671; strand 7 is antiparallel to the rest
Superfamily c.67.1: PLP-dependent transferases [53383] (10 families)
Family c.67.1.3: Cystathionine synthase-like [53402] (17 proteins)
Protein Methionine gamma-lyase, MGL [64126] (4 species)

Species:

Citrobacter freundii [TaxId:546] [142663] (6 PDB entries)
Uniprot Q84AR1 2-398
1. Domain for 1y4i:
  - Domain d1y4ia1: 1y4i A:2-398 [122619]
    complexed with so4
2. Domain for 2rfv:
  - Domain d2rfva_: 2rfv A: [168092]
    automated match to d1y4ia1
    complexed with cl
3. Domain for 3jw9:
  - Domain d3jw9a_: 3jw9 A: [178866]
    automated match to d1y4ia1
    complexed with ecx, peg
4. Domain for 3jwa:
  - Domain d3jwaa_: 3jwa A: [178867]
    automated match to d1y4ia1
    complexed with mpj, peg
5. Domain for 3jwb:
  - Domain d3jwba_: 3jwb A: [178868]
    automated match to d1y4ia1
    complexed with nle, peg
6. Domain for 3mkj:
  - Domain d3mkja_: 3mkj A: [181349]
    automated match to d1y4ia1
    complexed with pzp
Pseudomonas putida [TaxId:303] [75271] (4 PDB entries)
Uniprot P13254
1. Domains for 1gc0:
  1. Domain d1gc0a_: 1gc0 A: [70168]
  2. Domain d1gc0b_: 1gc0 B: [70169]
  3. Domain d1gc0c_: 1gc0 C: [70170]
  4. Domain d1gc0d_: 1gc0 D: [70171]
2. Domains for 1gc2:
  1. Domain d1gc2a_: 1gc2 A: [70172]
  2. Domain d1gc2b_: 1gc2 B: [70173]
  3. Domain d1gc2c_: 1gc2 C: [70174]
  4. Domain d1gc2d_: 1gc2 D: [70175]
3. Domains for 1pg8:
  1. Domain d1pg8a_: 1pg8 A: [104150]
    complexed with peg, plp, so4
  2. Domain d1pg8b_: 1pg8 B: [104151]
    complexed with peg, plp, so4
  3. Domain d1pg8c_: 1pg8 C: [104152]
    complexed with peg, plp, so4
  4. Domain d1pg8d_: 1pg8 D: [104153]
    complexed with peg, plp, so4
4. Domains for 1ukj:
  1. Domain d1ukja_: 1ukj A: [113259]
    complexed with so4
  2. Domain d1ukjb_: 1ukj B: [113260]
    complexed with so4
  3. Domain d1ukjc_: 1ukj C: [113261]
    complexed with so4
  4. Domain d1ukjd_: 1ukj D: [113262]
    complexed with so4
Trichomonas vaginalis, MGL1 [TaxId:5722] [64127] (2 PDB entries)
1. Domains for 1e5e:
  1. Domain d1e5ea_: 1e5e A: [59265]
    complexed with gol, ppj, so4
  2. Domain d1e5eb_: 1e5e B: [59266]
    complexed with gol, ppj, so4
2. Domains for 1e5f:
  1. Domain d1e5fa_: 1e5f A: [59267]
    complexed with gol, plp, so4
  2. Domain d1e5fb_: 1e5f B: [59268]
    complexed with gol, plp, so4
Trichomonas vaginalis, MGL2 [TaxId:5722] [110683] (1 PDB entry)
Uniprot O15565
- Domains for 1pff:
  1. Domain d1pffa_: 1pff A: [104143]
    complexed with edo, peg
  2. Domain d1pffb_: 1pff B: [104144]
    complexed with edo, peg

More info for Protein Methionine gamma-lyase, MGL from c.67.1.3: Cystathionine synthase-like

Timeline for Protein Methionine gamma-lyase, MGL from c.67.1.3: Cystathionine synthase-like:

Protein Methionine gamma-lyase, MGL from c.67.1.3: Cystathionine synthase-like first appeared in SCOP 1.57
Protein Methionine gamma-lyase, MGL from c.67.1.3: Cystathionine synthase-like appears in SCOP 1.75
Protein Methionine gamma-lyase, MGL from c.67.1.3: Cystathionine synthase-like appears in SCOPe 2.02
Protein Methionine gamma-lyase, MGL from c.67.1.3: Cystathionine synthase-like appears in the current release, SCOPe 2.08