SCOPe 2.03: Protein: Prolyl-tRNA synthetase (ProRS) domain

Lineage for Protein: Prolyl-tRNA synthetase (ProRS) domain

Root: SCOPe 2.03
Class c: Alpha and beta proteins (a/b) [51349] (147 folds)
Fold c.51: Anticodon-binding domain-like [52953] (6 superfamilies)
3 layers: a/b/a; mixed beta-sheet of five strands, order 21345; strand 4 is antiparallel to the rest
Superfamily c.51.1: Class II aaRS ABD-related [52954] (3 families)
Family c.51.1.1: Anticodon-binding domain of Class II aaRS [52955] (6 proteins)
Protein Prolyl-tRNA synthetase (ProRS) domain [64071] (3 species)

Species:

Methanocaldococcus jannaschii [TaxId:2190] [89715] (1 PDB entry)
- Domains for 1nj8:
  1. Domain d1nj8a1: 1nj8 A:268-393 [85769]
    Other proteins in same PDB: d1nj8a2, d1nj8a3, d1nj8b2, d1nj8b3, d1nj8c2, d1nj8c3, d1nj8d2, d1nj8d3
  2. Domain d1nj8b1: 1nj8 B:268-393 [85772]
    Other proteins in same PDB: d1nj8a2, d1nj8a3, d1nj8b2, d1nj8b3, d1nj8c2, d1nj8c3, d1nj8d2, d1nj8d3
  3. Domain d1nj8c1: 1nj8 C:268-393 [85775]
    Other proteins in same PDB: d1nj8a2, d1nj8a3, d1nj8b2, d1nj8b3, d1nj8c2, d1nj8c3, d1nj8d2, d1nj8d3
  4. Domain d1nj8d1: 1nj8 D:268-393 [85778]
    Other proteins in same PDB: d1nj8a2, d1nj8a3, d1nj8b2, d1nj8b3, d1nj8c2, d1nj8c3, d1nj8d2, d1nj8d3
Methanothermobacter thermautotrophicus [TaxId:145262] [89714] (4 PDB entries)
1. Domain for 1nj1:
  - Domain d1nj1a1: 1nj1 A:284-410 [85755]
    Other proteins in same PDB: d1nj1a2, d1nj1a3
    protein/RNA complex; complexed with 5ca, mg, zn
2. Domain for 1nj2:
  - Domain d1nj2a1: 1nj2 A:284-410 [85758]
    Other proteins in same PDB: d1nj2a2, d1nj2a3
    complexed with mg, zn
3. Domain for 1nj5:
  - Domain d1nj5a1: 1nj5 A:284-410 [85762]
    Other proteins in same PDB: d1nj5a2, d1nj5a3
    protein/RNA complex; complexed with mg, p5a, zn
4. Domain for 1nj6:
  - Domain d1nj6a1: 1nj6 A:284-410 [85765]
    Other proteins in same PDB: d1nj6a2, d1nj6a3
    protein/RNA complex; complexed with a5a, mg, zn
Thermus thermophilus [TaxId:274] [64072] (4 PDB entries)
1. Domains for 1h4q:
  1. Domain d1h4qa1: 1h4q A:277-403 [60598]
    Other proteins in same PDB: d1h4qa2, d1h4qa3, d1h4qb2, d1h4qb3
    protein/RNA complex; complexed with atp, pri, so4, zn
  2. Domain d1h4qb1: 1h4q B:277-403 [60601]
    Other proteins in same PDB: d1h4qa2, d1h4qa3, d1h4qb2, d1h4qb3
    protein/RNA complex; complexed with atp, pri, so4, zn
2. Domains for 1h4s:
  1. Domain d1h4sa1: 1h4s A:277-403 [60604]
    Other proteins in same PDB: d1h4sa2, d1h4sa3, d1h4sb2, d1h4sb3
    protein/RNA complex; complexed with psd, so4, zn
  2. Domain d1h4sb1: 1h4s B:277-403 [60607]
    Other proteins in same PDB: d1h4sa2, d1h4sa3, d1h4sb2, d1h4sb3
    protein/RNA complex; complexed with psd, so4, zn
3. Domains for 1h4t:
  1. Domain d1h4ta1: 1h4t A:277-403 [60610]
    Other proteins in same PDB: d1h4ta2, d1h4ta3, d1h4tb2, d1h4tb3, d1h4tc2, d1h4tc3, d1h4td2, d1h4td3
    protein/RNA complex; complexed with pro, zn
  2. Domain d1h4tb1: 1h4t B:277-403 [60613]
    Other proteins in same PDB: d1h4ta2, d1h4ta3, d1h4tb2, d1h4tb3, d1h4tc2, d1h4tc3, d1h4td2, d1h4td3
    protein/RNA complex; complexed with pro, zn
  3. Domain d1h4tc1: 1h4t C:277-403 [60616]
    Other proteins in same PDB: d1h4ta2, d1h4ta3, d1h4tb2, d1h4tb3, d1h4tc2, d1h4tc3, d1h4td2, d1h4td3
    protein/RNA complex; complexed with pro, zn
  4. Domain d1h4td1: 1h4t D:277-403 [60619]
    Other proteins in same PDB: d1h4ta2, d1h4ta3, d1h4tb2, d1h4tb3, d1h4tc2, d1h4tc3, d1h4td2, d1h4td3
    protein/RNA complex; complexed with pro, zn
4. Domains for 1hc7:
  1. Domain d1hc7a1: 1hc7 A:277-403 [60938]
    Other proteins in same PDB: d1hc7a2, d1hc7a3, d1hc7b2, d1hc7b3, d1hc7c2, d1hc7c3, d1hc7d2, d1hc7d3
    complexed with zn
  2. Domain d1hc7b1: 1hc7 B:277-403 [60941]
    Other proteins in same PDB: d1hc7a2, d1hc7a3, d1hc7b2, d1hc7b3, d1hc7c2, d1hc7c3, d1hc7d2, d1hc7d3
    complexed with zn
  3. Domain d1hc7c1: 1hc7 C:277-403 [60944]
    Other proteins in same PDB: d1hc7a2, d1hc7a3, d1hc7b2, d1hc7b3, d1hc7c2, d1hc7c3, d1hc7d2, d1hc7d3
    complexed with zn
  4. Domain d1hc7d1: 1hc7 D:277-403 [60947]
    Other proteins in same PDB: d1hc7a2, d1hc7a3, d1hc7b2, d1hc7b3, d1hc7c2, d1hc7c3, d1hc7d2, d1hc7d3
    complexed with zn

More info for Protein Prolyl-tRNA synthetase (ProRS) domain from c.51.1.1: Anticodon-binding domain of Class II aaRS

Timeline for Protein Prolyl-tRNA synthetase (ProRS) domain from c.51.1.1: Anticodon-binding domain of Class II aaRS:

Protein Prolyl-tRNA synthetase (ProRS) domain from c.51.1.1: Anticodon-binding domain of Class II aaRS first appeared in SCOP 1.57, called Protein C-terminal domain of ProRS from c.51.1.1: Anticodon-binding domain of Class II aaRS
Protein Prolyl-tRNA synthetase (ProRS) domain from c.51.1.1: Anticodon-binding domain of Class II aaRS appears in SCOPe 2.02
Protein Prolyl-tRNA synthetase (ProRS) domain from c.51.1.1: Anticodon-binding domain of Class II aaRS appears in SCOPe 2.04
Protein Prolyl-tRNA synthetase (ProRS) domain from c.51.1.1: Anticodon-binding domain of Class II aaRS appears in the current release, SCOPe 2.08