Lineage for Protein: Membrane fusion ATPase VCP/p97

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2109203Fold c.37: P-loop containing nucleoside triphosphate hydrolases [52539] (1 superfamily)
    3 layers: a/b/a, parallel or mixed beta-sheets of variable sizes
  4. 2109204Superfamily c.37.1: P-loop containing nucleoside triphosphate hydrolases [52540] (26 families) (S)
    division into families based on beta-sheet topologies
  5. 2113456Family c.37.1.20: Extended AAA-ATPase domain [81269] (29 protein domains)
    fold is similar to that of RecA, but lacks the last two strands, followed by a family-specific Arg-finger domain
  6. 2113662Protein Membrane fusion ATPase VCP/p97 [64038] (2 species)

Species:

  1. 2113663Mouse (Mus musculus) [TaxId:10090] [64039] (4 PDB entries)
    1. Domain for 1e32:
    2. Domains for 1r7r:
      1. 2113671Domain d1r7ra2: 1r7r A:201-470 [97204]
        Other proteins in same PDB: d1r7ra1, d1r7ra4
        complexed with adp
      2. 2113672Domain d1r7ra3: 1r7r A:471-735 [97205]
        Other proteins in same PDB: d1r7ra1, d1r7ra4
        complexed with adp
    3. Domains for 1s3s:
      1. 2113673Domain d1s3sa2: 1s3s A:201-458 [98440]
        Other proteins in same PDB: d1s3sa1, d1s3sa3, d1s3sb1, d1s3sb3, d1s3sc1, d1s3sc3, d1s3sd1, d1s3sd3, d1s3se1, d1s3se3, d1s3sf1, d1s3sf3, d1s3sg_, d1s3sh_, d1s3si_
        D1 domain from the N-D1 fragment
        complexed with adp
      2. 2113674Domain d1s3sb2: 1s3s B:201-458 [98443]
        Other proteins in same PDB: d1s3sa1, d1s3sa3, d1s3sb1, d1s3sb3, d1s3sc1, d1s3sc3, d1s3sd1, d1s3sd3, d1s3se1, d1s3se3, d1s3sf1, d1s3sf3, d1s3sg_, d1s3sh_, d1s3si_
        D1 domain from the N-D1 fragment
        complexed with adp
      3. 2113675Domain d1s3sc2: 1s3s C:201-458 [98446]
        Other proteins in same PDB: d1s3sa1, d1s3sa3, d1s3sb1, d1s3sb3, d1s3sc1, d1s3sc3, d1s3sd1, d1s3sd3, d1s3se1, d1s3se3, d1s3sf1, d1s3sf3, d1s3sg_, d1s3sh_, d1s3si_
        D1 domain from the N-D1 fragment
        complexed with adp
      4. 2113676Domain d1s3sd2: 1s3s D:201-458 [98449]
        Other proteins in same PDB: d1s3sa1, d1s3sa3, d1s3sb1, d1s3sb3, d1s3sc1, d1s3sc3, d1s3sd1, d1s3sd3, d1s3se1, d1s3se3, d1s3sf1, d1s3sf3, d1s3sg_, d1s3sh_, d1s3si_
        D1 domain from the N-D1 fragment
        complexed with adp
      5. 2113677Domain d1s3se2: 1s3s E:201-458 [98452]
        Other proteins in same PDB: d1s3sa1, d1s3sa3, d1s3sb1, d1s3sb3, d1s3sc1, d1s3sc3, d1s3sd1, d1s3sd3, d1s3se1, d1s3se3, d1s3sf1, d1s3sf3, d1s3sg_, d1s3sh_, d1s3si_
        D1 domain from the N-D1 fragment
        complexed with adp
      6. 2113678Domain d1s3sf2: 1s3s F:201-458 [98455]
        Other proteins in same PDB: d1s3sa1, d1s3sa3, d1s3sb1, d1s3sb3, d1s3sc1, d1s3sc3, d1s3sd1, d1s3sd3, d1s3se1, d1s3se3, d1s3sf1, d1s3sf3, d1s3sg_, d1s3sh_, d1s3si_
        D1 domain from the N-D1 fragment
        complexed with adp
    4. Domains for 3cf1:
      1. 2113665Domain d3cf1a2: 3cf1 A:201-470 [173177]
        Other proteins in same PDB: d3cf1a1, d3cf1a4, d3cf1b1, d3cf1b4, d3cf1c1, d3cf1c4
        complete low resolution structure
        complexed with adp, af3
      2. 2113666Domain d3cf1a3: 3cf1 A:471-763 [173178]
        Other proteins in same PDB: d3cf1a1, d3cf1a4, d3cf1b1, d3cf1b4, d3cf1c1, d3cf1c4
        complete low resolution structure
        complexed with adp, af3
      3. 2113667Domain d3cf1b2: 3cf1 B:201-470 [173181]
        Other proteins in same PDB: d3cf1a1, d3cf1a4, d3cf1b1, d3cf1b4, d3cf1c1, d3cf1c4
        complete low resolution structure
        complexed with adp, af3
      4. 2113668Domain d3cf1b3: 3cf1 B:471-763 [173182]
        Other proteins in same PDB: d3cf1a1, d3cf1a4, d3cf1b1, d3cf1b4, d3cf1c1, d3cf1c4
        complete low resolution structure
        complexed with adp, af3
      5. 2113669Domain d3cf1c2: 3cf1 C:201-470 [173185]
        Other proteins in same PDB: d3cf1a1, d3cf1a4, d3cf1b1, d3cf1b4, d3cf1c1, d3cf1c4
        complete low resolution structure
        complexed with adp, af3
      6. 2113670Domain d3cf1c3: 3cf1 C:471-763 [173186]
        Other proteins in same PDB: d3cf1a1, d3cf1a4, d3cf1b1, d3cf1b4, d3cf1c1, d3cf1c4
        complete low resolution structure
        complexed with adp, af3
  2. 2270181Homo sapiens [TaxId:9606] [313486] (3 PDB entries)
    1. Domain for 5dyg:
    2. Domains for 5ftj:
      1. 2271208Domain d5ftja3: 5ftj A:201-470 [314513]
        Other proteins in same PDB: d5ftja1, d5ftja2, d5ftjb1, d5ftjb2, d5ftjc1, d5ftjc2, d5ftjd1, d5ftjd2, d5ftje1, d5ftje2, d5ftjf1, d5ftjf2
        automated match to d3cf1a2
        complexed with adp, oja
      2. 2271209Domain d5ftja4: 5ftj A:471-763 [314514]
        Other proteins in same PDB: d5ftja1, d5ftja2, d5ftjb1, d5ftjb2, d5ftjc1, d5ftjc2, d5ftjd1, d5ftjd2, d5ftje1, d5ftje2, d5ftjf1, d5ftjf2
        automated match to d3cf1a3
        complexed with adp, oja
      3. 2271226Domain d5ftjb3: 5ftj B:201-470 [314531]
        Other proteins in same PDB: d5ftja1, d5ftja2, d5ftjb1, d5ftjb2, d5ftjc1, d5ftjc2, d5ftjd1, d5ftjd2, d5ftje1, d5ftje2, d5ftjf1, d5ftjf2
        automated match to d3cf1a2
        complexed with adp, oja
      4. 2271227Domain d5ftjb4: 5ftj B:471-763 [314532]
        Other proteins in same PDB: d5ftja1, d5ftja2, d5ftjb1, d5ftjb2, d5ftjc1, d5ftjc2, d5ftjd1, d5ftjd2, d5ftje1, d5ftje2, d5ftjf1, d5ftjf2
        automated match to d3cf1a3
        complexed with adp, oja
      5. 2271262Domain d5ftjf3: 5ftj F:201-470 [314567]
        Other proteins in same PDB: d5ftja1, d5ftja2, d5ftjb1, d5ftjb2, d5ftjc1, d5ftjc2, d5ftjd1, d5ftjd2, d5ftje1, d5ftje2, d5ftjf1, d5ftjf2
        automated match to d3cf1a2
        complexed with adp, oja
      6. 2271263Domain d5ftjf4: 5ftj F:471-763 [314568]
        Other proteins in same PDB: d5ftja1, d5ftja2, d5ftjb1, d5ftjb2, d5ftjc1, d5ftjc2, d5ftjd1, d5ftjd2, d5ftje1, d5ftje2, d5ftjf1, d5ftjf2
        automated match to d3cf1a3
        complexed with adp, oja
      7. 2271292Domain d5ftjd3: 5ftj D:201-470 [314597]
        Other proteins in same PDB: d5ftja1, d5ftja2, d5ftjb1, d5ftjb2, d5ftjc1, d5ftjc2, d5ftjd1, d5ftjd2, d5ftje1, d5ftje2, d5ftjf1, d5ftjf2
        automated match to d3cf1a2
        complexed with adp, oja
      8. 2271293Domain d5ftjd4: 5ftj D:471-763 [314598]
        Other proteins in same PDB: d5ftja1, d5ftja2, d5ftjb1, d5ftjb2, d5ftjc1, d5ftjc2, d5ftjd1, d5ftjd2, d5ftje1, d5ftje2, d5ftjf1, d5ftjf2
        automated match to d3cf1a3
        complexed with adp, oja
      9. 2271297Domain d5ftjc3: 5ftj C:201-470 [314602]
        Other proteins in same PDB: d5ftja1, d5ftja2, d5ftjb1, d5ftjb2, d5ftjc1, d5ftjc2, d5ftjd1, d5ftjd2, d5ftje1, d5ftje2, d5ftjf1, d5ftjf2
        automated match to d3cf1a2
        complexed with adp, oja
      10. 2271298Domain d5ftjc4: 5ftj C:471-763 [314603]
        Other proteins in same PDB: d5ftja1, d5ftja2, d5ftjb1, d5ftjb2, d5ftjc1, d5ftjc2, d5ftjd1, d5ftjd2, d5ftje1, d5ftje2, d5ftjf1, d5ftjf2
        automated match to d3cf1a3
        complexed with adp, oja
      11. 2271829Domain d5ftje3: 5ftj E:201-470 [315130]
        Other proteins in same PDB: d5ftja1, d5ftja2, d5ftjb1, d5ftjb2, d5ftjc1, d5ftjc2, d5ftjd1, d5ftjd2, d5ftje1, d5ftje2, d5ftjf1, d5ftjf2
        automated match to d3cf1a2
        complexed with adp, oja
      12. 2271830Domain d5ftje4: 5ftj E:471-763 [315131]
        Other proteins in same PDB: d5ftja1, d5ftja2, d5ftjb1, d5ftjb2, d5ftjc1, d5ftjc2, d5ftjd1, d5ftjd2, d5ftje1, d5ftje2, d5ftjf1, d5ftjf2
        automated match to d3cf1a3
        complexed with adp, oja
    3. Domains for 5ftk:
      1. 2271222Domain d5ftkf3: 5ftk F:201-470 [314527]
        Other proteins in same PDB: d5ftka1, d5ftka2, d5ftkb1, d5ftkb2, d5ftkc1, d5ftkc2, d5ftkd1, d5ftkd2, d5ftke1, d5ftke2, d5ftkf1, d5ftkf2
        automated match to d3cf1a2
        complexed with adp
      2. 2271223Domain d5ftkf4: 5ftk F:471-763 [314528]
        Other proteins in same PDB: d5ftka1, d5ftka2, d5ftkb1, d5ftkb2, d5ftkc1, d5ftkc2, d5ftkd1, d5ftkd2, d5ftke1, d5ftke2, d5ftkf1, d5ftkf2
        automated match to d3cf1a3
        complexed with adp
      3. 2271233Domain d5ftkd3: 5ftk D:201-470 [314538]
        Other proteins in same PDB: d5ftka1, d5ftka2, d5ftkb1, d5ftkb2, d5ftkc1, d5ftkc2, d5ftkd1, d5ftkd2, d5ftke1, d5ftke2, d5ftkf1, d5ftkf2
        automated match to d3cf1a2
        complexed with adp
      4. 2271234Domain d5ftkd4: 5ftk D:471-763 [314539]
        Other proteins in same PDB: d5ftka1, d5ftka2, d5ftkb1, d5ftkb2, d5ftkc1, d5ftkc2, d5ftkd1, d5ftkd2, d5ftke1, d5ftke2, d5ftkf1, d5ftkf2
        automated match to d3cf1a3
        complexed with adp
      5. 2271245Domain d5ftke3: 5ftk E:201-470 [314550]
        Other proteins in same PDB: d5ftka1, d5ftka2, d5ftkb1, d5ftkb2, d5ftkc1, d5ftkc2, d5ftkd1, d5ftkd2, d5ftke1, d5ftke2, d5ftkf1, d5ftkf2
        automated match to d3cf1a2
        complexed with adp
      6. 2271246Domain d5ftke4: 5ftk E:471-763 [314551]
        Other proteins in same PDB: d5ftka1, d5ftka2, d5ftkb1, d5ftkb2, d5ftkc1, d5ftkc2, d5ftkd1, d5ftkd2, d5ftke1, d5ftke2, d5ftkf1, d5ftkf2
        automated match to d3cf1a3
        complexed with adp
      7. 2271271Domain d5ftka3: 5ftk A:201-470 [314576]
        Other proteins in same PDB: d5ftka1, d5ftka2, d5ftkb1, d5ftkb2, d5ftkc1, d5ftkc2, d5ftkd1, d5ftkd2, d5ftke1, d5ftke2, d5ftkf1, d5ftkf2
        automated match to d3cf1a2
        complexed with adp
      8. 2271272Domain d5ftka4: 5ftk A:471-763 [314577]
        Other proteins in same PDB: d5ftka1, d5ftka2, d5ftkb1, d5ftkb2, d5ftkc1, d5ftkc2, d5ftkd1, d5ftkd2, d5ftke1, d5ftke2, d5ftkf1, d5ftkf2
        automated match to d3cf1a3
        complexed with adp
      9. 2271281Domain d5ftkb3: 5ftk B:201-470 [314586]
        Other proteins in same PDB: d5ftka1, d5ftka2, d5ftkb1, d5ftkb2, d5ftkc1, d5ftkc2, d5ftkd1, d5ftkd2, d5ftke1, d5ftke2, d5ftkf1, d5ftkf2
        automated match to d3cf1a2
        complexed with adp
      10. 2271282Domain d5ftkb4: 5ftk B:471-763 [314587]
        Other proteins in same PDB: d5ftka1, d5ftka2, d5ftkb1, d5ftkb2, d5ftkc1, d5ftkc2, d5ftkd1, d5ftkd2, d5ftke1, d5ftke2, d5ftkf1, d5ftkf2
        automated match to d3cf1a3
        complexed with adp
      11. 2271319Domain d5ftkc3: 5ftk C:201-470 [314624]
        Other proteins in same PDB: d5ftka1, d5ftka2, d5ftkb1, d5ftkb2, d5ftkc1, d5ftkc2, d5ftkd1, d5ftkd2, d5ftke1, d5ftke2, d5ftkf1, d5ftkf2
        automated match to d3cf1a2
        complexed with adp
      12. 2271320Domain d5ftkc4: 5ftk C:471-763 [314625]
        Other proteins in same PDB: d5ftka1, d5ftka2, d5ftkb1, d5ftkb2, d5ftkc1, d5ftkc2, d5ftkd1, d5ftkd2, d5ftke1, d5ftke2, d5ftkf1, d5ftkf2
        automated match to d3cf1a3
        complexed with adp

More info for Protein Membrane fusion ATPase VCP/p97 from c.37.1.20: Extended AAA-ATPase domain

Timeline for Protein Membrane fusion ATPase VCP/p97 from c.37.1.20: Extended AAA-ATPase domain: