SCOPe 2.08: Protein: Calicivirus capsid protein

Lineage for Protein: Calicivirus capsid protein

Root: SCOPe 2.08
Class b: All beta proteins [48724] (180 folds)

Fold b.121: Nucleoplasmin-like/VP (viral coat and capsid proteins) [88632] (7 superfamilies)
sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands
characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies

Superfamily b.121.4: Positive stranded ssRNA viruses [88633] (10 families)
Family b.121.4.3: Caliciviridae-like VP [88637] (2 proteins)
Protein Calicivirus capsid protein [63691] (1 species)
includes the P (protruding) domain of complex beta-structure containing a beta-barrel similar to the second domain of EF-TU

Species:

Norwalk virus [TaxId:11983] [63692] (1 PDB entry)
- Domains for 1ihm:
  1. Domain d1ihma_: 1ihm A: [62385]
  2. Domain d1ihmb_: 1ihm B: [62386]
  3. Domain d1ihmc_: 1ihm C: [62387]

More info for Protein Calicivirus capsid protein from b.121.4.3: Caliciviridae-like VP

Timeline for Protein Calicivirus capsid protein from b.121.4.3: Caliciviridae-like VP:

Protein Calicivirus capsid protein from b.121.4.3: Caliciviridae-like VP first appeared in SCOP 1.57, called Protein Calcivirus capsid protein from b.10.1.4: Animal virus proteins
Protein Calicivirus capsid protein from b.121.4.3: Caliciviridae-like VP appears in SCOPe 2.07