SCOPe 2.05: Family b.43.4.2: Ferredoxin reductase FAD-binding domain-like

Lineage for Family b.43.4.2: Ferredoxin reductase FAD-binding domain-like

1. Root: SCOPe 2.05

2. Class b: All beta proteins [48724] (176 folds)

3. Fold b.43: Reductase/isomerase/elongation factor common domain [50412] (4 superfamilies)
   barrel, closed; n=6, S=10; greek-key

4. Superfamily b.43.4: Riboflavin synthase domain-like [63380] (4 families)

5. Family b.43.4.2: Ferredoxin reductase FAD-binding domain-like [63381] (10 proteins)
   coupled with a NADP-binding domain of alpha/beta class

Proteins:

1. Benzoate dioxygenase reductase [74959] (1 species)

   • Species Acinetobacter sp. [TaxId:472] [74960] (1 PDB entry)

2. cytochrome b5 reductase [50427] (3 species)

   1. Species Human (Homo sapiens) [TaxId:9606] [117215] (1 PDB entry)
      Uniprot P00387 30-300

   2. Species Norway rat (Rattus norvegicus) [TaxId:10116] [69273] (3 PDB entries)
      Uniprot P20070 33-300

   3. Species Pig (Sus scrofa), liver [TaxId:9823] [50428] (7 PDB entries)

3. Dihydroorotate dehydrogenase B, PyrK subunit [50433] (1 species)

   • Species Lactococcus lactis, isozyme B [TaxId:1358] [50434] (3 PDB entries)

4. Ferredoxin reductase (flavodoxin reductase) N-terminal domain [50415] (9 species)

   1. Species Anabaena sp., pcc 7119 [TaxId:1167] [50420] (19 PDB entries)

   2. Species Azotobacter vinelandii [TaxId:354] [50422] (1 PDB entry)

   3. Species Escherichia coli [TaxId:562] [50421] (1 PDB entry)

   4. Species Maize (Zea mays), leaf isoform [TaxId:4577] [50419] (2 PDB entries)

   5. Species Maize (Zea mays), root isoform [TaxId:4577] [63786] (1 PDB entry)

   6. Species Paprika (Capsicum annuum) [TaxId:4072] [50418] (1 PDB entry)

   7. Species Pea (Pisum sativum) [TaxId:3888] [50417] (4 PDB entries)

   8. Species Pseudomonas aeruginosa [TaxId:287] [225368] (2 PDB entries)

   9. Species Spinach (Spinacia oleracea) [TaxId:3562] [50416] (7 PDB entries)

5. Flavohemoglobin, central domain [50436] (2 species)
   contains additional globin domain

   1. Species Alcaligenes eutrophus [TaxId:106590] [50437] (1 PDB entry)

   2. Species Escherichia coli [TaxId:562] [74961] (1 PDB entry)

6. Methane monooxygenase component C, MmoC [117216] (1 species)

   • Species Methylococcus capsulatus [TaxId:414] [117217] (1 PDB entry)
     Uniprot P22868 99-348 # structure of the N-terminal, 2Fe-2S ferredoxin domain is also known (1JQ4; (69669))

7. NAD(P)H:flavin oxidoreductase [50423] (1 species)

   • Species Escherichia coli [TaxId:562] [50424] (1 PDB entry)

8. Nitrate reductase core domain [50425] (1 species)

   • Species Maize (Zea mays) [TaxId:4577] [50426] (3 PDB entries)

9. Phthalate dioxygenase reductase [50430] (1 species)
   contains additional 2Fe-2S ferredoxin domain

   • Species Pseudomonas cepacia, db01 [TaxId:292] [50431] (1 PDB entry)

10. automated matches [227029] (5 species)
    not a true protein

    1. Species Anabaena pcc7119 [TaxId:1168] [254930] (1 PDB entry)

    2. Species Anabaena sp. [TaxId:1167] [229044] (3 PDB entries)

    3. Species Anabaena sp. [TaxId:1168] [254929] (3 PDB entries)

    4. Species Maize (Zea mays) [TaxId:4577] [225854] (1 PDB entry)

    5. Species Nostoc sp. [TaxId:1168] [229175] (3 PDB entries)

More info for Family b.43.4.2: Ferredoxin reductase FAD-binding domain-like

Timeline for Family b.43.4.2: Ferredoxin reductase FAD-binding domain-like:

• Family b.43.4.2: Ferredoxin reductase FAD-binding domain-like first appeared in SCOP 1.57
  
• Family b.43.4.2: Ferredoxin reductase FAD-binding domain-like appears in SCOPe 2.04
  
• Family b.43.4.2: Ferredoxin reductase FAD-binding domain-like appears in SCOPe 2.06
  
• Family b.43.4.2: Ferredoxin reductase FAD-binding domain-like appears in the current release, SCOPe 2.08