SCOP 1.65: Domain d1jsma_: 1jsm A:

Lineage for d1jsma_ (1jsm A:)

1. Root: SCOP 1.65

2. Class b: All beta proteins [48724] (126 folds)

3. Fold b.19: Viral protein domain [49817] (1 superfamily)
   sandwich; 9 strands in 2 sheets; jelly-roll; form trimers

4. Superfamily b.19.1: Viral protein domain [49818] (3 families)
   forms homotrimers

5. Family b.19.1.2: Influenza hemagglutinin headpice [49823] (1 protein)

6. Protein Hemagglutinin [49824] (1 species)
   includes rudiment esterase domain

7. Species Influenza A virus, different strains [TaxId:11320] [49825] (25 PDB entries)

8. Domain d1jsma_: 1jsm A: [63264]
   Other proteins in same PDB: d1jsmb_
   complexed with nag

Details for d1jsma_

PDB Entry: 1jsm, 1.9 Å

PDB Description: structure of h5 avian haemagglutinin

SCOP Domain Sequences for d1jsma_:

Sequence; same for both SEQRES and ATOM records:

>d1jsma_ b.19.1.2 (A:) Hemagglutinin {Influenza A virus, different strains}
dqicigyhannsteqvdtimeknvtvthaqdilekthngklcdlngvkplilrdcsvagw
llgnpmcdeflnvpewsyivekdnpvnglcypenfndyeelkhllsstnhfekiriiprs
swsnhdassgvssacpyngrssffrnvvwlikknnayptikrsynntnqedllilwgihh
pndaaeqtklyqnpttyvsvgtstlnqrsvpeiatrpkvngqsgrmeffwtilkpndain
fesngnfiapeyaykivkkggsaimksgleygncntkcqtpmgainssmpfhnihpltig
ecpkyvksgrlvlatglrnvp

Timeline for d1jsma_:

• d1jsma_ first appeared in SCOP 1.57
  
• d1jsma_ appears in SCOP 1.63
  
• d1jsma_ appears in SCOP 1.67
  
• d1jsma_ appears in the current release, SCOPe 2.08