Structural Classification of Proteins and ASTRAL release 1.75B (January 2013)
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Lineage for d1jgyl_ (1jgy L:)

  1. Root: SCOP 1.75B
  2. Class f: Membrane and cell surface proteins and peptides [56835] (57 folds)
  3. Fold f.26: Bacterial photosystem II reaction centre, L and M subunits [81484] (1 superfamily)
    five transmembrane helices forming a sheet-like structure
  4. Superfamily f.26.1: Bacterial photosystem II reaction centre, L and M subunits [81483] (1 family) (S)
  5. Family f.26.1.1: Bacterial photosystem II reaction centre, L and M subunits [81482] (5 protein domains)
    L and M are probably related to each other
  6. Protein L (light) subunit [81477] (3 species)
  7. Species Rhodobacter sphaeroides [TaxId:1063] [81475] (49 PDB entries)
    Uniprot P02954
  8. Domain d1jgyl_: 1jgy L: [63028]
    Other proteins in same PDB: d1jgyh1, d1jgyh2, d1jgym_
    complexed with bcl, bph, cdl, fe, spo, u10; mutant

Details for d1jgyl_

PDB Entry: 1jgy (more details)
PDB Description: photosynthetic reaction center mutant with tyr m 76 replaced
PDB Compounds: (L:) Photosynthetic reaction center L subunit

SCOP Domain Sequences for d1jgyl_:

Sequence; same for both SEQRES and ATOM records: (download)

>d1jgyl_ f.26.1.1 (L:) L (light) subunit {Rhodobacter sphaeroides [TaxId: 1063]}
allsferkyrvpggtlvggnlfdfwvgpfyvgffgvatfffaalgiiliawsavlqgtwn
pqlisvyppaleyglggaplakgglwqiiticatgafvswalreveicrklgigyhipfa
fafailayltlvlfrpvmmgawgyafpygiwthldwvsntgytygnfhynpahmiaisff
ftnalalalhgalvlsaanpekgkemrtpdhedtffrdlvgysigtlgihrlglllslsa
vffsalcmiitgtiwfdqwvdwwqwwvklpwwanipgging

SCOP Domain Coordinates for d1jgyl_:

Click to download the PDB-style file with coordinates for d1jgyl_.
(The format of our PDB-style files is described here.)

Timeline for d1jgyl_:

d1jgyl_ appears in SCOP 1.75A


d1jgyl_
(click for larger image)


d1jgyl_ in context of chain



d1jgyl_ in context of PDB
Domains from other chains:
d1jgyh1, d1jgyh2, d1jgym_


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