SCOP 1.65: Domain d1jdfb1: 1jdf B:138-446

Lineage for d1jdfb1 (1jdf B:138-446)

1. Root: SCOP 1.65

2. Class c: Alpha and beta proteins (a/b) [51349] (121 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (26 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.11: Enolase C-terminal domain-like [51604] (2 families)
   binds metal ion (magnesium or manganese) in conserved site inside barrel
   N-terminal alpha+beta domain is common to this family

5. Family c.1.11.2: D-glucarate dehydratase-like [51609] (7 proteins)

6. Protein D-glucarate dehydratase [51610] (2 species)

7. Species Escherichia coli [TaxId:562] [51612] (6 PDB entries)

8. Domain d1jdfb1: 1jdf B:138-446 [62899]
   Other proteins in same PDB: d1jdfa2, d1jdfb2, d1jdfc2, d1jdfd2

Details for d1jdfb1

PDB Entry: 1jdf, 2 Å

PDB Description: glucarate dehydratase from e.coli n341d mutant

SCOP Domain Sequences for d1jdfb1:

Sequence, based on SEQRES records:

>d1jdfb1 c.1.11.2 (B:138-446) D-glucarate dehydratase {Escherichia coli}
dgqqrsevemlgylffvgnrkatplpyqsqpddscdwyrlrheeamtpdavvrlaeaaye
kygfndfklkggvlageeeaesivalaqrfpqaritldpngawslneaikigkylkgsla
yaedpcgaeqgfsgrevmaefrratglptatnmiatdwrqmghtlslqsvdipladphfw
tmqgsvrvaqmchefgltwgshsdnhfdislamfthvaaaapgkitaidthwiwqegnqr
ltkepfeikgglvqvpekpglgveidmdqvmkahelyqkhglgarddamgmqylipgwtf
dnkrpcmvr

Sequence, based on observed residues (ATOM records):

>d1jdfb1 c.1.11.2 (B:138-446) D-glucarate dehydratase {Escherichia coli}
dgqqrsevemlgylffvgnraatplpyqsqpadscdwyrlrheeamtpdavvalaeaaye
kygfndfklkggvlagaeeaesivalaqrfpqaritldpngawslneaikigkylkgsla
yaedpcgaeqgfsgrevmaefrratglptatnmiatdwrqmghtlslqsvdipladphfw
tmqgsvrvaqmchefgltwgshsdnhfdislamfthvaaaapgkitaidthwiwqegnqr
ltkepfeiagglvqvpekpglgveidmdqvmkahalyqkhglgarddamgmqylipgwtf
dnkrpcmvr

Timeline for d1jdfb1:

• d1jdfb1 first appeared in SCOP 1.57
  
• d1jdfb1 appears in SCOP 1.63
  
• d1jdfb1 appears in SCOP 1.67
  
• d1jdfb1 appears in the current release, SCOPe 2.08