SCOP 1.71: Domain d1j79b_: 1j79 B:

Lineage for d1j79b_ (1j79 B:)

1. Root: SCOP 1.71

2. Class c: Alpha and beta proteins (a/b) [51349] (134 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (32 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.9: Metallo-dependent hydrolases [51556] (13 families)
   the beta-sheet barrel is similarly distorted and capped by a C-terminal helix
   has transition metal ions bound inside the barrel

5. Family c.1.9.4: Dihydroorotase [63917] (1 protein)

6. Protein Dihydroorotase [63918] (1 species)

7. Species Escherichia coli [TaxId:562] [63919] (1 PDB entry)

8. Domain d1j79b_: 1j79 B: [62676]
   complexed with ncd, oro, zn

Details for d1j79b_

PDB Entry: 1j79, 1.7 Å

PDB Description: Molecular Structure of Dihydroorotase: A Paradigm for Catalysis Through the Use of a Binuclear Metal Center

SCOP Domain Sequences for d1j79b_:

Sequence, based on SEQRES records:

>d1j79b_ c.1.9.4 (B:) Dihydroorotase {Escherichia coli}
sqvlkirrpddwhlhlrdgdmlktvvpytseiygraivmpnlappvttveaavayrqril
davpaphdftplmtcyltdsldpnelergfnegvftaaklypanattnsshgvtsvdaim
pvlermekigmpllvhgevthadidifdrearfiesvmeplrqrltalkvvfehittkda
adyvrdgnerlaatitpqhlmfnrnhmlvggvrphlyclpilkrnihqqalrelvasgfq
rvflgtdsapharhrkesscgcagcfnaptalgsyatvfeemnalqhfeafcsvngpqfy
glpvndtfielvreeqqvaesialtddtlvpflagetvrwsvk

Sequence, based on observed residues (ATOM records):

>d1j79b_ c.1.9.4 (B:) Dihydroorotase {Escherichia coli}
sqvlkirrpddwhlhlrdgdmlktvvpytseiygraivmpnlappvttveaavayrqril
davpaphdftplmtcyltdsldpnelergfnegvftaaklypanashgvtsvdaimpvle
rmekigmpllvhgevthadidifdrearfiesvmeplrqrltalkvvfehittkdaadyv
rdgnerlaatitpqhlmfnrnhmlvggvrphlyclpilkrnihqqalrelvasgfqrvfl
gtdsapharhrkesscgcagcfnaptalgsyatvfeemnalqhfeafcsvngpqfyglpv
ndtfielvreeqqvaesialtddtlvpflagetvrwsvk

Timeline for d1j79b_:

• d1j79b_ first appeared in SCOP 1.57
  
• d1j79b_ appears in SCOP 1.69
  
• d1j79b_ appears in SCOP 1.73
  
• d1j79b_ appears in the current release, SCOPe 2.08