Lineage for d1ipga1 (1ipg A:6-85)

  1. Root: SCOPe 2.07
  2. 2494617Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2501110Fold d.15: beta-Grasp (ubiquitin-like) [54235] (14 superfamilies)
    core: beta(2)-alpha-beta(2); mixed beta-sheet 2143
  4. 2502906Superfamily d.15.2: CAD & PB1 domains [54277] (3 families) (S)
    contain extra helix; similar heterodimerization modes; possibly related to the ubiquitin-like superfamily
  5. 2502922Family d.15.2.2: PB1 domain [64225] (11 proteins)
    Pfam PF00564
    forms heterodimers, although not all PB1 domain pairs associate.
  6. 2502923Protein Bud emergence mediator Bemp1 [64226] (1 species)
  7. 2502924Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [64227] (2 PDB entries)
  8. 2502926Domain d1ipga1: 1ipg A:6-85 [62639]
    Other proteins in same PDB: d1ipga2

Details for d1ipga1

PDB Entry: 1ipg (more details)

PDB Description: solution structure of the pb1 domain of bem1p
PDB Compounds: (A:) bem1 protein

SCOPe Domain Sequences for d1ipga1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1ipga1 d.15.2.2 (A:6-85) Bud emergence mediator Bemp1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

SCOPe Domain Coordinates for d1ipga1:

Click to download the PDB-style file with coordinates for d1ipga1.
(The format of our PDB-style files is described here.)

Timeline for d1ipga1:

View in 3D
Domains from same chain:
(mouse over for more information)