SCOPe 2.02: Domain d1in8a2: 1in8 A:17-254

Lineage for d1in8a2 (1in8 A:17-254)

1. Root: SCOPe 2.02

2. Class c: Alpha and beta proteins (a/b) [51349] (147 folds)

3. Fold c.37: P-loop containing nucleoside triphosphate hydrolases [52539] (1 superfamily)
   3 layers: a/b/a, parallel or mixed beta-sheets of variable sizes

4. Superfamily c.37.1: P-loop containing nucleoside triphosphate hydrolases [52540] (25 families)
   division into families based on beta-sheet topologies

5. Family c.37.1.20: Extended AAA-ATPase domain [81269] (29 proteins)
   fold is similar to that of RecA, but lacks the last two strands, followed by a family-specific Arg-finger domain

6. Protein Holliday junction helicase RuvB [52713] (2 species)
   contains "winged helix" DNA-binding domain after the family specific domains

7. Species Thermotoga maritima [TaxId:2336] [64037] (6 PDB entries)

8. Domain d1in8a2: 1in8 A:17-254 [62606]
   Other proteins in same PDB: d1in8a1
   complexed with adp

Details for d1in8a2

PDB Entry: 1in8, 1.9 Å

PDB Description: thermotoga maritima ruvb t158v

PDB Compounds: (A:) holliday junction DNA helicase ruvb

SCOPe Domain Sequences for d1in8a2:

Sequence, based on SEQRES records:

>d1in8a2 c.37.1.20 (A:17-254) Holliday junction helicase RuvB {Thermotoga maritima [TaxId: 2336]}
qflrpksldefigqenvkkklslaleaakmrgevldhvllagppglgkttlahiiaselq
tnihvtsgpvlvkqgdmaailtslergdvlfideihrlnkaveellysaiedfqidimig
kgpsaksiridiqpftlvgatvrsgllssplrsrfgiileldfytvkelkeiikraaslm
dveiedaaaemiakrsrgtpriairltkrvrdmltvvkadrintdivlktmevlnidd

Sequence, based on observed residues (ATOM records):

>d1in8a2 c.37.1.20 (A:17-254) Holliday junction helicase RuvB {Thermotoga maritima [TaxId: 2336]}
qflrpksldefigqenvkkklslaleaakmrgevldhvllagppglgkttlahiiaselq
tnihvtsgpvlvkqgdmaailtslergdvlfideihrlnkaveellysaiedfqidiqpf
tlvgatvrsgllssplrsrfgiileldfytvkelkeiikraaslmdveiedaaaemiakr
srgtpriairltkrvrdmltvvkadrintdivlktmevlnidd

Timeline for d1in8a2:

• d1in8a2 first appeared in SCOP 1.57
  
• d1in8a2 appears in SCOPe 2.01
  
• d1in8a2 appears in SCOPe 2.03
  
• d1in8a2 appears in the current release, SCOPe 2.08