Lineage for d1ijqb1 (1ijq B:377-642)

  1. Root: SCOPe 2.08
  2. 2739516Class b: All beta proteins [48724] (180 folds)
  3. 2807606Fold b.68: 6-bladed beta-propeller [50938] (11 superfamilies)
    consists of six 4-stranded beta-sheet motifs; meander
  4. 2808412Superfamily b.68.5: YWTD domain [63825] (1 family) (S)
  5. 2808413Family b.68.5.1: YWTD domain [63826] (2 proteins)
  6. 2808414Protein Low density lipoprotein (LDL) receptor [63827] (1 species)
  7. 2808415Species Human (Homo sapiens) [TaxId:9606] [63828] (2 PDB entries)
  8. 2808417Domain d1ijqb1: 1ijq B:377-642 [62508]
    Other proteins in same PDB: d1ijqa2, d1ijqb2

Details for d1ijqb1

PDB Entry: 1ijq (more details), 1.5 Å

PDB Description: crystal structure of the ldl receptor ywtd-egf domain pair
PDB Compounds: (B:) low-density lipoprotein receptor

SCOPe Domain Sequences for d1ijqb1:

Sequence, based on SEQRES records: (download)

>d1ijqb1 b.68.5.1 (B:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]}
iaylfftnrhevrkmtldrseytslipnlrnvvaldtevasnriywsdlsqrmicstqld
rahgvssydtvisrdiqapdglavdwihsniywtdsvlgtvsvadtkgvkrktlfrengs
kpraivvdpvhgfmywtdwgtpakikkgglngvdiyslvteniqwpngitldllsgrlyw
vdsklhsissidvnggnrktiledekrlahpfslavfedkvfwtdiineaifsanrltgs
dvnllaenllspedmvlfhnltqprg

Sequence, based on observed residues (ATOM records): (download)

>d1ijqb1 b.68.5.1 (B:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]}
iaylfftnrhevrkmtlseytslipnlrnvvaldtevasnriywsdlsqrmicstqydtv
isrdiqapdglavdwihsniywtdsvlgtvsvadtkgvkrktlfrengskpraivvdpvh
gfmywtdwgtpakikkgglngvdiyslvteniqwpngitldllsgrlywvdsklhsissi
dvnggnrktiledekrlahpfslavfedkvfwtdiineaifsanrltgsdvnllaenlls
pedmvlfhnltqprg

SCOPe Domain Coordinates for d1ijqb1:

Click to download the PDB-style file with coordinates for d1ijqb1.
(The format of our PDB-style files is described here.)

Timeline for d1ijqb1:

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Domains from same chain:
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d1ijqb2