SCOPe 2.08: Domain d1iita1: 1iit A:6-226

Lineage for d1iita1 (1iit A:6-226)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.94: Periplasmic binding protein-like II [53849] (1 superfamily)
   consists of two similar intertwined domain with 3 layers (a/b/a) each: duplication
   mixed beta-sheet of 5 strands, order 21354; strand 5 is antiparallel to the rest

4. Superfamily c.94.1: Periplasmic binding protein-like II [53850] (4 families)
   Similar in architecture to the superfamily I but partly differs in topology

5. Family c.94.1.1: Phosphate binding protein-like [53851] (45 proteins)
   has additional insertions and/or extensions that are not grouped together
   

6. Protein Glutamate receptor ligand binding core [53881] (5 species)

7. Species Synechocystis sp., GluR0 [TaxId:1143] [64192] (3 PDB entries)

8. Domain d1iita1: 1iit A:6-226 [62460]
   Other proteins in same PDB: d1iita2
   complexed with ser

Details for d1iita1

PDB Entry: 1iit, 1.9 Å

PDB Description: glur0 ligand binding core complex with l-serine

PDB Compounds: (A:) Slr1257 protein

SCOPe Domain Sequences for d1iita1:

Sequence, based on SEQRES records:

>d1iita1 c.94.1.1 (A:6-226) Glutamate receptor ligand binding core {Synechocystis sp., GluR0 [TaxId: 1143]}
lkvgvvgnppfvfygegknaaftgisldvwravaesqkwnseyvrqnsisagitavaege
ldiligpisvtperaaiegitftqpyfssgigllipgtatplfrsvgdlknkevavvrdt
tavdwanfyqadvretnnltaaitllqkkqveavmfdrpaliyytrqnpnlnlevteirv
slepygfvlkensplqktinvemlnllysrviaefterwlg

Sequence, based on observed residues (ATOM records):

>d1iita1 c.94.1.1 (A:6-226) Glutamate receptor ligand binding core {Synechocystis sp., GluR0 [TaxId: 1143]}
lkvgvvgnppfvfygaftgisldvwravaesqkwnseyvrqnsisagitavaegeldili
gpisvtperaaiegitftqpyfssgigllipgtatplfrsvgdlknkevavvrdttavdw
anfyqadvretnnltaaitllqkkqveavmfdrpaliyytrqnpnlnlevteirvslepy
gfvlkensplqktinvemlnllysrviaefterwlg

Timeline for d1iita1:

• d1iita1 first appeared in SCOP 1.57, called d1iita_
  
• d1iita1 appears in SCOPe 2.07