Lineage for d1i8fd1 (1i8f D:9-80)

  1. Root: SCOPe 2.07
  2. 2344607Class b: All beta proteins [48724] (178 folds)
  3. 2380450Fold b.38: Sm-like fold [50181] (5 superfamilies)
    core: barrel, open; n*=4, S*=8; meander; SH3-like topology
  4. 2380451Superfamily b.38.1: Sm-like ribonucleoproteins [50182] (7 families) (S)
  5. 2380452Family b.38.1.1: Sm motif of small nuclear ribonucleoproteins, SNRNP [50183] (10 protein domains)
    forms homo and heteroheptameric ring structures
    Pfam PF01423
  6. 2380453Protein Archaeal homoheptameric Sm protein [63758] (6 species)
  7. 2380549Species Pyrobaculum aerophilum [TaxId:13773] [63760] (2 PDB entries)
  8. 2380553Domain d1i8fd1: 1i8f D:9-80 [61962]
    Other proteins in same PDB: d1i8fc2, d1i8fd2, d1i8ff2
    complexed with gol

Details for d1i8fd1

PDB Entry: 1i8f (more details), 1.75 Å

PDB Description: the crystal structure of a heptameric archaeal sm protein: implications for the eukaryotic snrnp core
PDB Compounds: (D:) putative snrnp sm-like protein

SCOPe Domain Sequences for d1i8fd1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1i8fd1 b.38.1.1 (D:9-80) Archaeal homoheptameric Sm protein {Pyrobaculum aerophilum [TaxId: 13773]}

SCOPe Domain Coordinates for d1i8fd1:

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Timeline for d1i8fd1: