SCOPe 2.04: Domain d1i6va2: 1i6v A:50-172

Lineage for d1i6va2 (1i6v A:50-172)

1. Root: SCOPe 2.04

2. Class d: Alpha and beta proteins (a+b) [53931] (380 folds)

3. Fold d.181: Insert subdomain of RNA polymerase alpha subunit [56552] (1 superfamily)
   unusual fold; contains a left-handed beta-alpha-beta unit

4. Superfamily d.181.1: Insert subdomain of RNA polymerase alpha subunit [56553] (1 family)
   automatically mapped to Pfam PF01000

5. Family d.181.1.1: Insert subdomain of RNA polymerase alpha subunit [56554] (2 proteins)

6. Protein RNA polymerase alpha subunit [56555] (3 species)

7. Species Thermus aquaticus [TaxId:271] [64461] (4 PDB entries)

8. Domain d1i6va2: 1i6v A:50-172 [61853]
   Other proteins in same PDB: d1i6va1, d1i6vb1, d1i6vc_, d1i6vd_, d1i6ve_
   protein/DNA complex; protein/RNA complex; complexed with mg, rfp, zn

Details for d1i6va2

PDB Entry: 1i6v, 3.3 Å

PDB Description: thermus aquaticus core rna polymerase-rifampicin complex

PDB Compounds: (A:) DNA-directed RNA polymerase

SCOPe Domain Sequences for d1i6va2:

Sequence; same for both SEQRES and ATOM records:

>d1i6va2 d.181.1.1 (A:50-172) RNA polymerase alpha subunit {Thermus aquaticus [TaxId: 271]}
gtavtsvyiedvlhefstipgvkedvveiilnlkelvvrfldpkmasttlilraegpkev
ravdftpsadveimnpdlhiatleeggklymevrvdrgvgyvpaerhgikdrinaipvda
ifs

Timeline for d1i6va2:

• d1i6va2 first appeared in SCOP 1.57
  
• d1i6va2 appears in SCOPe 2.03
  
• d1i6va2 appears in SCOPe 2.05
  
• d1i6va2 appears in the current release, SCOPe 2.08