SCOPe 2.07: Domain d1i3qe2: 1i3q E:144-215

Lineage for d1i3qe2 (1i3q E:144-215)

1. Root: SCOPe 2.07

2. Class d: Alpha and beta proteins (a+b) [53931] (388 folds)

3. Fold d.78: RPB5-like RNA polymerase subunit [55286] (1 superfamily)
   core: beta-alpha-beta-alpha-beta(2); 2 layers, alpha/beta

4. Superfamily d.78.1: RPB5-like RNA polymerase subunit [55287] (2 families)
   automatically mapped to Pfam PF01191

5. Family d.78.1.1: RPB5 [55288] (2 proteins)

6. Protein Eukaryotic RPB5 C-terminal domain [55292] (2 species)

7. Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [55293] (27 PDB entries)
   Uniprot P20434; part of multichain biological unit

8. Domain d1i3qe2: 1i3q E:144-215 [61612]
   Other proteins in same PDB: d1i3qa_, d1i3qb_, d1i3qc1, d1i3qc2, d1i3qe1, d1i3qf_, d1i3qh_, d1i3qi1, d1i3qi2, d1i3qj_, d1i3qk_, d1i3ql_
   protein/RNA complex; complexed with mg, zn

Details for d1i3qe2

PDB Entry: 1i3q, 3.1 Å

PDB Description: rna polymerase ii crystal form i at 3.1 a resolution

PDB Compounds: (E:) DNA-directed RNA polymerase II 27kd polypeptide

SCOPe Domain Sequences for d1i3qe2:

Sequence; same for both SEQRES and ATOM records:

>d1i3qe2 d.78.1.1 (E:144-215) Eukaryotic RPB5 C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
ithhelvpkhirlssdekrellkryrlkesqlpriqradpvalylglkrgevvkiirkse
tsgryasyricm

Timeline for d1i3qe2:

• d1i3qe2 first appeared in SCOP 1.57
  
• d1i3qe2 appears in SCOPe 2.06
  
• d1i3qe2 appears in the current release, SCOPe 2.08