Class e: Multi-domain proteins (alpha and beta) [56572] (66 folds) |
Fold e.29: beta and beta-prime subunits of DNA dependent RNA-polymerase [64483] (1 superfamily) Multidomain subunits of complex domain organization |
Superfamily e.29.1: beta and beta-prime subunits of DNA dependent RNA-polymerase [64484] (2 families) The catalytic site is formed by the association of two double-psi beta-barrel domains, one from each subunit |
Family e.29.1.2: RNA-polymerase beta-prime [64490] (2 proteins) |
Protein RBP1 [64486] (1 species) |
Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [64487] (24 PDB entries) Uniprot P04050; part of multichain biological unit |
Domain d1i3qa_: 1i3q A: [61607] Other proteins in same PDB: d1i3qb_, d1i3qc1, d1i3qc2, d1i3qe1, d1i3qe2, d1i3qf_, d1i3qh_, d1i3qi1, d1i3qi2, d1i3qj_, d1i3qk_, d1i3ql_ protein/RNA complex; complexed with mg, zn |
PDB Entry: 1i3q (more details), 3.1 Å
SCOPe Domain Sequences for d1i3qa_:
Sequence, based on SEQRES records: (download)
>d1i3qa_ e.29.1.2 (A:) RBP1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} vgqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsi drnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnel mrqalaikdskkrfaaiwtlcktkmvcetdvpseddptqlvsrggcgntqptirkdglkl vgswkkdratgdadepelrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpv ppppvrpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfhva tymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnlel dqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskra gdiqlqygwkverhimdndpvlfnrqpslhkmsmmahrvkvipystfrlnlsvtspynad fdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfi eldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspk dngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhng fstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrf lneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvd rtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavktaetgyiqrrl vkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdl lntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnir riiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccl lrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtl ntfhfagvaskkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaieht tlksvtiaseiyydpdprstvipedeeiiqlhfslldeeaeqsfdqqspwllrleldraa mndkdltmgqvgerikqtfkndlfviwsedndekliircrvvrpksldaeteaeedhmlk kientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpg idptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggl tsvtrhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgaf dvmi
>d1i3qa_ e.29.1.2 (A:) RBP1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} vgqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsi drnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnel mrqalaikdskkrfaaiwtlcktkmvcetdvpseddptqlvsrggcgntqptirkdglkl vgswkkdratgdadepelrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpv ppppvrpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfhva tymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnlel dqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskra gdiqlqygwkverhimdndpvlfnrqpslhkmsmmahrvkvipystfrlnlsvtspynad fdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfi eldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspk dngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhng fstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrf lneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvd rtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavktaetgyiqrrl vkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdl lntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnir riiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccl lrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtl kkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiase iyydpdprstvipedeeiiqlhfslqqspwllrleldraamndkdltmgqvgerikqtfk ndlfviwsedndekliircrvvaeedhmlkkientmlenitlrgveniervvmmkydrkv psptgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalyke vynviasdgsyvnyrhmallvdvmttqggltsvtrhgfnrsntgalmrcsfeetveilfe agasaelddcrgvsenvilgqmapigtgafdvmi
Timeline for d1i3qa_: