SCOPe 2.08: Domain d1fngd2: 1fng D:4-92

Lineage for d1fngd2 (1fng D:4-92)

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.19: MHC antigen-recognition domain [54451] (1 superfamily)
   dimeric

4. Superfamily d.19.1: MHC antigen-recognition domain [54452] (2 families)

5. Family d.19.1.1: MHC antigen-recognition domain [54453] (13 proteins)

6. Protein Class II MHC beta chain, N-terminal domain [88819] (15 species)

7. Species Mouse (Mus musculus), I-EK [TaxId:10090] [88827] (10 PDB entries)

8. Domain d1fngd2: 1fng D:4-92 [59911]
   Other proteins in same PDB: d1fnga1, d1fnga2, d1fngb1, d1fngc1, d1fngc2, d1fngd1
   contains covalently bound peptides at the N-termini of chains B and D
   complexed with nag
   fragment; missing more than one-third of the common structure and/or sequence

Details for d1fngd2

PDB Entry: 1fng, 1.9 Å

PDB Description: histocompatibility antigen

PDB Compounds: (D:) protein (MHC class II I-ek, beta chain)

SCOPe Domain Sequences for d1fngd2:

Sequence; same for both SEQRES and ATOM records:

>d1fngd2 d.19.1.1 (D:4-92) Class II MHC beta chain, N-terminal domain {Mouse (Mus musculus), I-EK [TaxId: 10090]}
rpwfleycksechfyngtqrvrllvryfynleenlrfdsdvgefravtelgrpdaenwns
qpefleqkraevdtvcrhnyeifdnflvp

Timeline for d1fngd2:

• d1fngd2 first appeared in SCOP 1.57
  
• d1fngd2 appears in SCOPe 2.07