Lineage for d1ek3b_ (1ek3 B:)

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2017115Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 2017116Superfamily b.1.1: Immunoglobulin [48726] (5 families) (S)
  5. 2017117Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (33 protein domains)
  6. 2018294Protein Immunoglobulin light chain kappa variable domain, VL-kappa [88519] (16 species)
    VL-kappa domains of human and mouse antibodies are clustered by the sequence similarity within the germline encoded segment and then by the size of the complementarity determining regions CDR1 and CDR2, so the clusters may correspond to putative germline families in the species genomes; VL-kappa domains with artificial or grafted exogenous CDRs are listed as engineered species
  7. 2018423Species Human (Homo sapiens), cluster 2 [TaxId:9606] [88521] (10 PDB entries)
  8. 2018432Domain d1ek3b_: 1ek3 B: [59435]
    VL dimer of Bence-Jones protein REC
    complexed with ca, cl

Details for d1ek3b_

PDB Entry: 1ek3 (more details), 1.9 Å

PDB Description: kappa-4 immunoglobulin vl, rec
PDB Compounds: (B:) kappa-4 immunoglobulin light chain vl

SCOPe Domain Sequences for d1ek3b_:

Sequence; same for both SEQRES and ATOM records: (download)

>d1ek3b_ b.1.1.1 (B:) Immunoglobulin light chain kappa variable domain, VL-kappa {Human (Homo sapiens), cluster 2 [TaxId: 9606]}

SCOPe Domain Coordinates for d1ek3b_:

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Timeline for d1ek3b_: