SCOPe 2.04: Domain d1ee1b_: 1ee1 B:

Lineage for d1ee1b_ (1ee1 B:)

1. Root: SCOPe 2.04

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.26: Adenine nucleotide alpha hydrolase-like [52373] (3 superfamilies)
   core: 3 layers, a/b/a ; parallel beta-sheet of 5 strands, order 32145

4. Superfamily c.26.2: Adenine nucleotide alpha hydrolases-like [52402] (7 families)
   share similar mode of ligand (Adenosine group) binding
   can be subdivided into two group with closer relationships within each group than between the groups; the first three families form one group whereas the last two families form the other group

5. Family c.26.2.1: N-type ATP pyrophosphatases [52403] (9 proteins)

6. Protein NH3-dependent NAD+-synthetase [52406] (4 species)

7. Species Bacillus subtilis [TaxId:1423] [52407] (7 PDB entries)

8. Domain d1ee1b_: 1ee1 B: [59410]
   complexed with atp, dnd, mg

Details for d1ee1b_

PDB Entry: 1ee1, 2.06 Å

PDB Description: crystal structure of nh3-dependent nad+ synthetase from bacillus subtilis complexed with one molecule atp, two molecules deamido-nad+ and one mg2+ ion

PDB Compounds: (B:) nh(3)-dependent nad(+) synthetase

SCOPe Domain Sequences for d1ee1b_:

Sequence, based on SEQRES records:

>d1ee1b_ c.26.2.1 (B:) NH3-dependent NAD+-synthetase {Bacillus subtilis [TaxId: 1423]}
smqekimrelhvkpsidpkqeiedrvnflkqyvkktgakgfvlgisggqdstlagrlaql
avesireeggdaqfiavrlphgtqqdeddaqlalkfikpdkswkfdikstvsafsdqyqq
etgdqltdfnkgnvkartrmiaqyaiggqegllvlgtdhaaeavtgfftkygdggadllp
ltgltkrqgrtllkelgaperlylkeptadlldekpqqsdetelgisydeiddylegkev
sakvsealekrysmtehkrqvpasmfddwwk

Sequence, based on observed residues (ATOM records):

>d1ee1b_ c.26.2.1 (B:) NH3-dependent NAD+-synthetase {Bacillus subtilis [TaxId: 1423]}
smqekimrelhvkpsidpkqeiedrvnflkqyvkktgakgfvlgisggqdstlagrlaql
avesireeggdaqfiavrlphgeddaqlalkfikpdkswkfdikstvsafsdqyqqetgd
qltdfnkgnvkartrmiaqyaiggqegllvlgtdhaaeavtgfftkygdggadllpltgl
tkrqgrtllkelgaperlylisydeiddylegkevsakvsealekrysmtehkrqvpasm
fddwwk

Timeline for d1ee1b_:

• d1ee1b_ first appeared in SCOP 1.57
  
• d1ee1b_ appears in SCOPe 2.03
  
• d1ee1b_ appears in SCOPe 2.05
  
• d1ee1b_ appears in the current release, SCOPe 2.08