Lineage for d1dp3a_ (1dp3 A:)

  1. Root: SCOPe 2.07
  2. 2299346Class a: All alpha proteins [46456] (289 folds)
  3. 2323932Fold a.55: IHF-like DNA-binding proteins [47728] (1 superfamily)
    core: 4 helices; bundle, partly opened, capped with a beta-sheet
  4. 2323933Superfamily a.55.1: IHF-like DNA-binding proteins [47729] (3 families) (S)
    dimer of identical subunits
  5. 2323988Family a.55.1.2: DNA-binding domain (fragment?) of the TraM protein [63566] (2 proteins)
    old provisional classification awaiting the entire protein structure; structure of a different fragment of this protein (PDB 2g7o) is classified into a different superfamily
    automatically mapped to Pfam PF05261
  6. 2323989Protein DNA-binding domain (fragment?) of the TraM protein [63567] (1 species)
  7. 2323990Species Escherichia coli [TaxId:562] [63568] (1 PDB entry)
  8. 2323991Domain d1dp3a_: 1dp3 A: [59128]

Details for d1dp3a_

PDB Entry: 1dp3 (more details)

PDB Description: solution structure of the dna binding domain of the tram protein
PDB Compounds: (A:) tram protein

SCOPe Domain Sequences for d1dp3a_:

Sequence; same for both SEQRES and ATOM records: (download)

>d1dp3a_ a.55.1.2 (A:) DNA-binding domain (fragment?) of the TraM protein {Escherichia coli [TaxId: 562]}

SCOPe Domain Coordinates for d1dp3a_:

Click to download the PDB-style file with coordinates for d1dp3a_.
(The format of our PDB-style files is described here.)

Timeline for d1dp3a_: