Lineage for Species: Synthetic

  1. Root: SCOPe 2.03
  2. 1472417Class k: Designed proteins [58788] (44 folds)
  3. 1472784Fold k.23: Scorpion toxin-based designs [58917] (1 superfamily)
  4. 1472785Superfamily k.23.1: Scorpion toxin-based designs [58918] (2 families) (S)
  5. 1472790Family k.23.1.2: Mini-protein reproducing the core of the CD4 surface [58922] (1 protein)
  6. 1472791Protein Mini-protein reproducing the core of the CD4 surface [58923] (1 species)
    interacting with the hiv-1 envelope glycoprotein
  7. 1472792Species Synthetic [58924] (5 PDB entries)

PDB entries in Species: Synthetic:

  1. Domain(s) for 1d5q:
  2. Domain(s) for 1yyl:
    1. 1472799Domain d1yylm1: 1yyl M:2-27 [144721]
      Other proteins in same PDB: d1yylg_, d1yylh1, d1yylh2, d1yyll1, d1yyll2, d1yylp_, d1yylq1, d1yylq2, d1yylr1, d1yylr2
      complexed with nag, ndg
    2. 1472800Domain d1yyls1: 1yyl S:1002-1027 [144722]
      Other proteins in same PDB: d1yylg_, d1yylh1, d1yylh2, d1yyll1, d1yyll2, d1yylp_, d1yylq1, d1yylq2, d1yylr1, d1yylr2
      automatically matched to 1YYL M:2-27
      complexed with nag, ndg
  3. Domain(s) for 1yym:
    1. 1472793Domain d1yymm1: 1yym M:2-27 [144723]
      Other proteins in same PDB: d1yymg_, d1yymh1, d1yymh2, d1yyml1, d1yyml2, d1yymp_, d1yymq1, d1yymq2, d1yymr1, d1yymr2
      complexed with edo, ipa, nag, ndg
    2. 1472794Domain d1yyms1: 1yym S:1002-1027 [144724]
      Other proteins in same PDB: d1yymg_, d1yymh1, d1yymh2, d1yyml1, d1yyml2, d1yymp_, d1yymq1, d1yymq2, d1yymr1, d1yymr2
      automatically matched to 1YYM M:2-27
      complexed with edo, ipa, nag, ndg
  4. Domain(s) for 2i5y:
    1. 1472795Domain d2i5ym1: 2i5y M:2-27 [145504]
      Other proteins in same PDB: d2i5yg_, d2i5yh1, d2i5yh2, d2i5yl1, d2i5yl2, d2i5yp_, d2i5yq1, d2i5yq2, d2i5yr1, d2i5yr2
      complexed with nag, ndg
    2. 1472796Domain d2i5ys1: 2i5y S:2-27 [145505]
      Other proteins in same PDB: d2i5yg_, d2i5yh1, d2i5yh2, d2i5yl1, d2i5yl2, d2i5yp_, d2i5yq1, d2i5yq2, d2i5yr1, d2i5yr2
      complexed with nag, ndg
  5. Domain(s) for 2i60:
    1. 1472797Domain d2i60m1: 2i60 M:2-27 [145506]
      Other proteins in same PDB: d2i60g_, d2i60h1, d2i60h2, d2i60l1, d2i60l2, d2i60p_, d2i60q1, d2i60q2, d2i60r1, d2i60r2
      complexed with ipa, nag, ndg
    2. 1472798Domain d2i60s1: 2i60 S:2-27 [145507]
      Other proteins in same PDB: d2i60g_, d2i60h1, d2i60h2, d2i60l1, d2i60l2, d2i60p_, d2i60q1, d2i60q2, d2i60r1, d2i60r2
      complexed with ipa, nag, ndg

More info for Species Synthetic from k.23.1.2 Mini-protein reproducing the core of the CD4 surface

Timeline for Species Synthetic from k.23.1.2 Mini-protein reproducing the core of the CD4 surface: