SCOPe 2.01: Family k.12.1.1: Zinc finger design

Lineage for Family k.12.1.1: Zinc finger design

1. Root: SCOPe 2.01

2. Class k: Designed proteins [58788] (44 folds)

3. Fold k.12: Zinc finger design [58856] (1 superfamily)

4. Superfamily k.12.1: Zinc finger design [58857] (1 family)

5. Family k.12.1.1: Zinc finger design [58858] (7 proteins)

Proteins:

1. AART, designed six-finger protein [144340] (1 species)

   • Species Synthetic [144341] (1 PDB entry)

2. Designed zinc finger protein [58859] (3 species)

   1. Species Human (Homo sapiens) [TaxId:9606] [161316] (87 PDB entries)

   2. Species Mouse (Mus musculus) [TaxId:10090] [161315] (1 PDB entry)

   3. Species Synthetic consensus sequence, non-biological source [58860] (1 PDB entry)

3. E6-binding zinc finger, different constructs [111544] (2 species)

   1. Species Human (Homo sapiens) [TaxId:9606] [161318] (1 PDB entry)

   2. Species Synthetic [111545] (2 PDB entries)

4. FSD-EY [64669] (1 species)

   • Species Synthetic [64670] (1 PDB entry)

5. HIV REV-targetting Znf29 [161319] (1 species)

   • Species Synthetic [161320] (2 PDB entries)

6. TATA box-binding zinc finger, TATAZF [64671] (1 species)

   • Species Mouse (Mus musculus), Zif268 based [TaxId:10090] [64672] (2 PDB entries)

7. Zinc finger with an artificial beta-turn [58861] (2 species)
   original sequence taken from the third zinc finger domain of the human transcriptional repressor protein yy1

   1. Species Human (Homo sapiens) [TaxId:9606] [161317] (4 PDB entries)

   2. Species Synthetic, based on Homo sapiens sequence [58862] (1 PDB entry)

More info for Family k.12.1.1: Zinc finger design

Timeline for Family k.12.1.1: Zinc finger design:

• Family k.12.1.1: Zinc finger design first appeared (with stable ids) in SCOP 1.55
  
• Family k.12.1.1: Zinc finger design appears in SCOP 1.75
  
• Family k.12.1.1: Zinc finger design appears in SCOPe 2.02
  
• Family k.12.1.1: Zinc finger design appears in the current release, SCOPe 2.08