Lineage for Protein: 50S subunit

  1. Root: SCOP 1.63
  2. 272796Class i: Low resolution protein structures [58117] (18 folds)
  3. 272797Fold i.1: Ribosome and ribosomal fragments [58118] (1 superfamily)
  4. 272798Superfamily i.1.1: Ribosome and ribosomal fragments [58119] (3 families) (S)
  5. Family i.1.1.2: Large subunit [58124] (3 proteins)
  6. Protein 50S subunit [58125] (3 species)

Species:

  1. 273048Archaeon Haloarcula marismortui [TaxId:2238] [58126] (3 PDB entries)
    1. Domains for 1c04:
      1. 273049Domain d1c04a_: 1c04 A: [45827]
      2. 273050Domain d1c04b_: 1c04 B: [45828]
      3. 273051Domain d1c04c_: 1c04 C: [45829]
      4. 273052Domain d1c04d_: 1c04 D: [45830]
      5. Domain d1c04e_: 1c04 E: [45831]
      6. Domain d1c04f_: 1c04 F: [45832]
    2. Domain for 1ffz:
    3. Domain for 1fg0:
      • Domain d1fg0a_: 1fg0 A: [45833]
        complexed with a 13 bp minihelix- puromycin compound
  2. Deinococcus radiodurans [TaxId:1299] [69993] (10 PDB entries)
    1. Domains for 1j5a:
      1. Domain d1j5aa_: 1j5a A: [71536]
      2. 273105Domain d1j5ak_: 1j5a K: [71537]
      3. 273106Domain d1j5al_: 1j5a L: [71538]
      4. 273107Domain d1j5am_: 1j5a M: [71539]
    2. Domains for 1jzx:
      1. Domain d1jzxa_: 1jzx A: [67884]
      2. 273090Domain d1jzxk_: 1jzx K: [67885]
      3. 273091Domain d1jzxl_: 1jzx L: [67886]
      4. 273092Domain d1jzxm_: 1jzx M: [67887]
    3. Domains for 1jzy:
      1. Domain d1jzya_: 1jzy A: [67888]
      2. 273101Domain d1jzyk_: 1jzy K: [67889]
      3. 273102Domain d1jzyl_: 1jzy L: [67890]
      4. 273103Domain d1jzym_: 1jzy M: [67891]
    4. Domains for 1jzz:
      1. Domain d1jzza_: 1jzz A: [67892]
      2. 273094Domain d1jzzk_: 1jzz K: [67893]
      3. 273095Domain d1jzzl_: 1jzz L: [67894]
      4. 273096Domain d1jzzm_: 1jzz M: [67895]
    5. Domains for 1k01:
      1. Domain d1k01a_: 1k01 A: [67900]
      2. 273109Domain d1k01k_: 1k01 K: [67901]
      3. 273110Domain d1k01l_: 1k01 L: [67902]
      4. 273111Domain d1k01m_: 1k01 M: [67903]
    6. Domains for 1njm:
      1. Domain d1njm0_: 1njm 0: [80547]
      2. 273113Domain d1njmk_: 1njm K: [80548]
      3. 273114Domain d1njmt_: 1njm T: [80549]
        complexed with a tRNA acceptor stem mimic (asm) and the antibiotic sparsomycin
    7. Domain for 1njn:
    8. Domain for 1njo:
      • Domain d1njo0_: 1njo 0: [80551]
        complexed with a short substrate analog accpuromycin (accp)
    9. Domains for 1njp:
      1. Domain d1njp0_: 1njp 0: [80552]
      2. 273098Domain d1njpk_: 1njp K: [80553]
      3. 273099Domain d1njpt_: 1njp T: [80554]
        complexed with a tRNA acceptor stem mimic (asm)
    10. Domains for 1nkw:
      1. Domain d1nkw0_: 1nkw 0: [80580]
      2. 273059Domain d1nkw1_: 1nkw 1: [80581]
      3. 273060Domain d1nkw2_: 1nkw 2: [80582]
      4. 273061Domain d1nkw3_: 1nkw 3: [80583]
      5. 273062Domain d1nkw4_: 1nkw 4: [80584]
        CA-atoms only for the ribosomal protein structures
      6. Domain d1nkw9_: 1nkw 9: [80585]
      7. 273064Domain d1nkwa_: 1nkw A: [80586]
      8. 273065Domain d1nkwb_: 1nkw B: [80587]
      9. 273066Domain d1nkwc_: 1nkw C: [80588]
      10. 273067Domain d1nkwd_: 1nkw D: [80589]
      11. 273068Domain d1nkwe_: 1nkw E: [80590]
      12. 273069Domain d1nkwf_: 1nkw F: [80591]
      13. 273070Domain d1nkwg_: 1nkw G: [80592]
      14. 273071Domain d1nkwh_: 1nkw H: [80593]
      15. 273072Domain d1nkwi_: 1nkw I: [80594]
      16. 273073Domain d1nkwj_: 1nkw J: [80595]
      17. 273074Domain d1nkwk_: 1nkw K: [80596]
      18. 273075Domain d1nkwl_: 1nkw L: [80597]
      19. 273076Domain d1nkwm_: 1nkw M: [80598]
      20. 273077Domain d1nkwn_: 1nkw N: [80599]
      21. 273078Domain d1nkwo_: 1nkw O: [80600]
      22. 273079Domain d1nkwp_: 1nkw P: [80601]
      23. 273080Domain d1nkwq_: 1nkw Q: [80602]
      24. 273081Domain d1nkwr_: 1nkw R: [80603]
      25. 273082Domain d1nkws_: 1nkw S: [80604]
      26. 273083Domain d1nkwt_: 1nkw T: [80605]
      27. 273084Domain d1nkwu_: 1nkw U: [80606]
      28. 273085Domain d1nkww_: 1nkw W: [80607]
      29. 273086Domain d1nkwx_: 1nkw X: [80608]
      30. 273087Domain d1nkwy_: 1nkw Y: [80609]
      31. 273088Domain d1nkwz_: 1nkw Z: [80610]
  3. 273117Escherichia coli [TaxId:562] [58127] (1 PDB entry)

More info for Protein 50S subunit from i.1.1.2: Large subunit

Timeline for Protein 50S subunit from i.1.1.2: Large subunit: