SCOPe 2.04: Family h.3.2.1: Virus ectodomain

Lineage for Family h.3.2.1: Virus ectodomain

1. Root: SCOPe 2.04

2. Class h: Coiled coil proteins [57942] (7 folds)

3. Fold h.3: Stalk segment of viral fusion proteins [58063] (3 superfamilies)
   core: trimeric coiled coil

4. Superfamily h.3.2: Virus ectodomain [58069] (2 families)

5. Family h.3.2.1: Virus ectodomain [58070] (9 proteins)

Proteins:

1. Core structure of Ebo gp2 [58076] (1 species)

   • Species Ebola virus [TaxId:205488] [58077] (2 PDB entries)

2. Fusion glycoprotein f0 [161261] (1 species)

   • Species Mumps virus [TaxId:11161] [161262] (1 PDB entry)
     Uniprot P11236 123-179,448-479

3. HERV-FRD_6p24.1 provirus ancestral Env polyprotein [144288] (1 species)

   • Species Human (Homo sapiens) [TaxId:9606] [144289] (1 PDB entry)
     Uniprot P60508 391-443

4. HRSV fusion protein core [58080] (1 species)

   • Species Human respiratory syncytial virus [TaxId:11250] [58081] (1 PDB entry)

5. HTLV-1 gp21 [58074] (1 species)

   • Species Human T-cell leukemia virus type 1 [TaxId:11908] [58075] (1 PDB entry)

6. MoMLV p15 core fragment [58627] (1 species)

   • Species Moloney murine leukemia virus, MoMLV [TaxId:11801] [58628] (1 PDB entry)

7. Paramyxovirus sv5 fusion protein core [58078] (1 species)
   trimer of heterodimers

   • Species Simian virus 5, strain w3 [TaxId:11207] [58079] (1 PDB entry)

8. Retrovius gp41 protease-resistant core [58071] (4 species)
   coiled coil; biological unit: trimer

   1. Species Human immunodeficiency virus type 1 [TaxId:11676] [58072] (23 PDB entries)

   2. Species Simian immunodeficiency virus [TaxId:11723] [58073] (10 PDB entries)

   3. Species Synthetic construct [TaxId:32630] [161260] (1 PDB entry)

   4. Species Visna virus [TaxId:11741] [64597] (1 PDB entry)

9. Stalk of the ectodomain of NDV fusion glycoprotein [69983] (1 species)

   • Species Newcastle disease virus [TaxId:11176] [69984] (1 PDB entry)

More info for Family h.3.2.1: Virus ectodomain

Timeline for Family h.3.2.1: Virus ectodomain:

• Family h.3.2.1: Virus ectodomain first appeared (with stable ids) in SCOP 1.55
  
• Family h.3.2.1: Virus ectodomain appears in SCOPe 2.03
  
• Family h.3.2.1: Virus ectodomain appears in SCOPe 2.05
  
• Family h.3.2.1: Virus ectodomain appears in the current release, SCOPe 2.08