SCOPe 2.06: Protein: Surfactant protein

Lineage for Protein: Surfactant protein

Root: SCOPe 2.06
Class h: Coiled coil proteins [57942] (7 folds)
Fold h.1: Parallel coiled-coil [57943] (38 superfamilies)
this is not a true fold; includes oligomers of shorter identical helices
Superfamily h.1.1: Triple coiled coil domain of C-type lectins [57944] (1 family)
Family h.1.1.1: Triple coiled coil domain of C-type lectins [57945] (3 proteins)
Protein Surfactant protein [57949] (2 species)

Species:

Human (Homo sapiens), SP-D [TaxId:9606] [57950] (24 PDB entries)
1. Domains for 1b08:
  1. Domain d1b08a2: 1b08 A:204-234 [45423]
    Other proteins in same PDB: d1b08a1, d1b08b1, d1b08c1
    complexed with ca
  2. Domain d1b08b2: 1b08 B:1205-1234 [45424]
    Other proteins in same PDB: d1b08a1, d1b08b1, d1b08c1
    complexed with ca
  3. Domain d1b08c2: 1b08 C:2208-2234 [45425]
    Other proteins in same PDB: d1b08a1, d1b08b1, d1b08c1
    complexed with ca
2. Domains for 1m7l:
  1. Domain d1m7la1: 1m7l A:1-38 [78735]
    Other proteins in same PDB: d1m7la2, d1m7lb2, d1m7lc2
  2. Domain d1m7lb1: 1m7l B:41-78 [78736]
    Other proteins in same PDB: d1m7la2, d1m7lb2, d1m7lc2
  3. Domain d1m7lc1: 1m7l C:81-118 [78737]
    Other proteins in same PDB: d1m7la2, d1m7lb2, d1m7lc2
3. Domains for 1pw9:
  1. Domain d1pw9a2: 1pw9 A:205-234 [95206]
    Other proteins in same PDB: d1pw9a1, d1pw9b1, d1pw9c1
    complexed with ca
  2. Domain d1pw9b2: 1pw9 B:205-234 [95208]
    Other proteins in same PDB: d1pw9a1, d1pw9b1, d1pw9c1
    complexed with ca
  3. Domain d1pw9c2: 1pw9 C:206-234 [95210]
    Other proteins in same PDB: d1pw9a1, d1pw9b1, d1pw9c1
    complexed with ca
4. Domains for 1pwb:
  1. Domain d1pwba2: 1pwb A:205-234 [95213]
    Other proteins in same PDB: d1pwba1, d1pwbb1, d1pwbc1
    complexed with ca, glc
  2. Domain d1pwbb2: 1pwb B:205-234 [95215]
    Other proteins in same PDB: d1pwba1, d1pwbb1, d1pwbc1
    complexed with ca, glc
  3. Domain d1pwbc2: 1pwb C:206-234 [95217]
    Other proteins in same PDB: d1pwba1, d1pwbb1, d1pwbc1
    complexed with ca, glc
5. Domains for 2ggu:
  1. Domain d2ggua2: 2ggu A:205-234 [135159]
    Other proteins in same PDB: d2ggua1, d2ggub1, d2gguc1
    complexed with ca, mlr
  2. Domain d2ggub2: 2ggu B:205-234 [135161]
    Other proteins in same PDB: d2ggua1, d2ggub1, d2gguc1
    complexed with ca, mlr
  3. Domain d2gguc2: 2ggu C:205-234 [135163]
    Other proteins in same PDB: d2ggua1, d2ggub1, d2gguc1
    complexed with ca, mlr
6. Domains for 2ggx:
  1. Domain d2ggxa2: 2ggx A:205-234 [135165]
    Other proteins in same PDB: d2ggxa1, d2ggxb1, d2ggxc1
    complexed with ca, npj
  2. Domain d2ggxb2: 2ggx B:205-234 [135167]
    Other proteins in same PDB: d2ggxa1, d2ggxb1, d2ggxc1
    complexed with ca, npj
  3. Domain d2ggxc2: 2ggx C:205-234 [135169]
    Other proteins in same PDB: d2ggxa1, d2ggxb1, d2ggxc1
    complexed with ca, npj
7. Domains for 2orj:
  1. Domain d2orja2: 2orj A:205-234 [139262]
    Other proteins in same PDB: d2orja1, d2orjb1, d2orjc1
    complexed with bm3, ca
  2. Domain d2orjb2: 2orj B:205-234 [139264]
    Other proteins in same PDB: d2orja1, d2orjb1, d2orjc1
    complexed with bm3, ca
  3. Domain d2orjc2: 2orj C:205-234 [139266]
    Other proteins in same PDB: d2orja1, d2orjb1, d2orjc1
    complexed with bm3, ca
8. Domains for 2ork:
  1. Domain d2orka2: 2ork A:205-234 [139268]
    Other proteins in same PDB: d2orka1, d2orkb1, d2orkc1
    complexed with ca, ipd
  2. Domain d2orkb2: 2ork B:205-234 [139270]
    Other proteins in same PDB: d2orka1, d2orkb1, d2orkc1
    complexed with ca, ipd
  3. Domain d2orkc2: 2ork C:206-234 [139272]
    Other proteins in same PDB: d2orka1, d2orkb1, d2orkc1
    complexed with ca, ipd
9. Domains for 2os9:
  1. Domain d2os9a2: 2os9 A:205-234 [139291]
    Other proteins in same PDB: d2os9a1, d2os9b1, d2os9c1
    complexed with ca, ins
  2. Domain d2os9b2: 2os9 B:205-234 [139293]
    Other proteins in same PDB: d2os9a1, d2os9b1, d2os9c1
    complexed with ca, ins
  3. Domain d2os9c2: 2os9 C:206-234 [139295]
    Other proteins in same PDB: d2os9a1, d2os9b1, d2os9c1
    complexed with ca, ins
10. Domains for 2ria:
  1. Domain d2riaa2: 2ria A:210-234 [152060]
    Other proteins in same PDB: d2riaa1, d2riab1, d2riac1
    complexed with 289, ca
  2. Domain d2riab2: 2ria B:210-234 [152062]
    Other proteins in same PDB: d2riaa1, d2riab1, d2riac1
    complexed with 289, ca
  3. Domain d2riac2: 2ria C:210-234 [152064]
    Other proteins in same PDB: d2riaa1, d2riab1, d2riac1
    complexed with 289, ca
11. Domains for 2rib:
  1. Domain d2riba2: 2rib A:206-234 [152066]
    Other proteins in same PDB: d2riba1, d2ribb1, d2ribc1
    complexed with ca, gmh
  2. Domain d2ribb2: 2rib B:204-234 [152068]
    Other proteins in same PDB: d2riba1, d2ribb1, d2ribc1
    complexed with ca, gmh
  3. Domain d2ribc2: 2rib C:206-234 [152070]
    Other proteins in same PDB: d2riba1, d2ribb1, d2ribc1
    complexed with ca, gmh
12. Domains for 2ric:
  1. Domain d2rica2: 2ric A:203-234 [152072]
    Other proteins in same PDB: d2rica1, d2rica3, d2ricb1, d2ricc1, d2ricc3
    complexed with ca, gmh
  2. Domain d2ricb2: 2ric B:204-234 [152074]
    Other proteins in same PDB: d2rica1, d2rica3, d2ricb1, d2ricc1, d2ricc3
    complexed with ca, gmh
  3. Domain d2ricc2: 2ric C:203-234 [152076]
    Other proteins in same PDB: d2rica1, d2rica3, d2ricb1, d2ricc1, d2ricc3
    complexed with ca, gmh
13. Domains for 2rid:
  1. Domain d2rida2: 2rid A:209-234 [152078]
    Other proteins in same PDB: d2rida1, d2ridb1, d2ridc1
    complexed with 291, ca
  2. Domain d2ridb2: 2rid B:205-234 [152080]
    Other proteins in same PDB: d2rida1, d2ridb1, d2ridc1
    complexed with 291, ca
  3. Domain d2ridc2: 2rid C:207-234 [152082]
    Other proteins in same PDB: d2rida1, d2ridb1, d2ridc1
    complexed with 291, ca
14. Domains for 2rie:
  1. Domain d2riea2: 2rie A:211-234 [152084]
    Other proteins in same PDB: d2riea1, d2rieb1, d2riec1
    complexed with 293, ca
  2. Domain d2rieb2: 2rie B:208-234 [152086]
    Other proteins in same PDB: d2riea1, d2rieb1, d2riec1
    complexed with 293, ca
  3. Domain d2riec2: 2rie C:211-234 [152088]
    Other proteins in same PDB: d2riea1, d2rieb1, d2riec1
    complexed with 293, ca
15. Domains for 3dbz:
  1. Domain d3dbza2: 3dbz A:205-234 [157527]
    Other proteins in same PDB: d3dbza1, d3dbzb1, d3dbzb3, d3dbzc1
    complexed with ca, mpd
  2. Domain d3dbzb2: 3dbz B:203-234 [157529]
    Other proteins in same PDB: d3dbza1, d3dbzb1, d3dbzb3, d3dbzc1
    complexed with ca, mpd
  3. Domain d3dbzc2: 3dbz C:206-234 [157531]
    Other proteins in same PDB: d3dbza1, d3dbzb1, d3dbzb3, d3dbzc1
    complexed with ca, mpd
16. Domains for 3g81:
  1. Domain d3g81a2: 3g81 A:205-234 [210440]
    Other proteins in same PDB: d3g81a1, d3g81b1, d3g81c1
    complexed with ca, mma
  2. Domain d3g81b2: 3g81 B:205-234 [210442]
    Other proteins in same PDB: d3g81a1, d3g81b1, d3g81c1
    complexed with ca, mma
  3. Domain d3g81c2: 3g81 C:206-234 [210444]
    Other proteins in same PDB: d3g81a1, d3g81b1, d3g81c1
    complexed with ca, mma
17. Domains for 3g83:
  1. Domain d3g83a2: 3g83 A:205-234 [210446]
    Other proteins in same PDB: d3g83a1, d3g83b1, d3g83c1
    complexed with ca
  2. Domain d3g83b2: 3g83 B:205-234 [210448]
    Other proteins in same PDB: d3g83a1, d3g83b1, d3g83c1
    complexed with ca
  3. Domain d3g83c2: 3g83 C:206-234 [210450]
    Other proteins in same PDB: d3g83a1, d3g83b1, d3g83c1
    complexed with ca
18. Domains for 3g84:
  1. Domain d3g84a2: 3g84 A:205-234 [210452]
    Other proteins in same PDB: d3g84a1, d3g84b1, d3g84c1
    complexed with ca; mutant
  2. Domain d3g84b2: 3g84 B:205-234 [210454]
    Other proteins in same PDB: d3g84a1, d3g84b1, d3g84c1
    complexed with ca; mutant
  3. Domain d3g84c2: 3g84 C:205-234 [210456]
    Other proteins in same PDB: d3g84a1, d3g84b1, d3g84c1
    complexed with ca; mutant
19. Domains for 3ikn:
  1. Domain d3ikna1: 3ikn A:204-234 [211785]
    Other proteins in same PDB: d3ikna2, d3iknb2, d3iknc2
    automated match to d1pwba2
    complexed with ca, gal
  2. Domain d3iknb1: 3ikn B:204-234 [211787]
    Other proteins in same PDB: d3ikna2, d3iknb2, d3iknc2
    automated match to d1pwba2
    complexed with ca, gal
  3. Domain d3iknc1: 3ikn C:204-234 [211789]
    Other proteins in same PDB: d3ikna2, d3iknb2, d3iknc2
    automated match to d1pwba2
    complexed with ca, gal
20. Domains for 3ikp:
  1. Domain d3ikpa1: 3ikp A:205-234 [211791]
    Other proteins in same PDB: d3ikpa2, d3ikpb2, d3ikpc2
    automated match to d1pwba2
    complexed with ca, ipd
  2. Domain d3ikpb1: 3ikp B:204-234 [211793]
    Other proteins in same PDB: d3ikpa2, d3ikpb2, d3ikpc2
    automated match to d1pwba2
    complexed with ca, ipd
  3. Domain d3ikpc1: 3ikp C:206-234 [211795]
    Other proteins in same PDB: d3ikpa2, d3ikpb2, d3ikpc2
    automated match to d1pwba2
    complexed with ca, ipd
21. Domains for 3ikq:
  1. Domain d3ikqa1: 3ikq A:210-234 [211797]
    Other proteins in same PDB: d3ikqa2, d3ikqb2, d3ikqc2
    automated match to d1pwba2
    complexed with ca, man
  2. Domain d3ikqb1: 3ikq B:210-234 [211799]
    Other proteins in same PDB: d3ikqa2, d3ikqb2, d3ikqc2
    automated match to d1pwba2
    complexed with ca, man
  3. Domain d3ikqc1: 3ikq C:211-234 [211801]
    Other proteins in same PDB: d3ikqa2, d3ikqb2, d3ikqc2
    automated match to d1pwba2
    complexed with ca, man
22. Domains for 3ikr:
  1. Domain d3ikra1: 3ikr A:204-234 [211803]
    Other proteins in same PDB: d3ikra2, d3ikrb2, d3ikrc2
    automated match to d1pwba2
    complexed with ca, man
  2. Domain d3ikrb1: 3ikr B:205-234 [211805]
    Other proteins in same PDB: d3ikra2, d3ikrb2, d3ikrc2
    automated match to d1pwba2
    complexed with ca, man
  3. Domain d3ikrc1: 3ikr C:204-234 [211807]
    Other proteins in same PDB: d3ikra2, d3ikrb2, d3ikrc2
    automated match to d1pwba2
    complexed with ca, man
23. Domains for 3kqg:
  1. Domain d3kqga2: 3kqg A:159-198 [199662]
    Other proteins in same PDB: d3kqga1, d3kqgb1, d3kqgc1, d3kqgd1, d3kqge1, d3kqgf1
    complexed with ca
  2. Domain d3kqgb2: 3kqg B:167-198 [199664]
    Other proteins in same PDB: d3kqga1, d3kqgb1, d3kqgc1, d3kqgd1, d3kqge1, d3kqgf1
    complexed with ca
  3. Domain d3kqgc2: 3kqg C:167-198 [199666]
    Other proteins in same PDB: d3kqga1, d3kqgb1, d3kqgc1, d3kqgd1, d3kqge1, d3kqgf1
    complexed with ca
  4. Domain d3kqgd2: 3kqg D:166-198 [199668]
    Other proteins in same PDB: d3kqga1, d3kqgb1, d3kqgc1, d3kqgd1, d3kqge1, d3kqgf1
    complexed with ca
  5. Domain d3kqge2: 3kqg E:167-198 [199670]
    Other proteins in same PDB: d3kqga1, d3kqgb1, d3kqgc1, d3kqgd1, d3kqge1, d3kqgf1
    complexed with ca
  6. Domain d3kqgf2: 3kqg F:165-198 [199672]
    Other proteins in same PDB: d3kqga1, d3kqgb1, d3kqgc1, d3kqgd1, d3kqge1, d3kqgf1
    complexed with ca
24. Domains for 4e52:
  1. Domain d4e52a1: 4e52 A:204-234 [220307]
    Other proteins in same PDB: d4e52a2, d4e52b2, d4e52c2
    automated match to d1pwba2
    complexed with ca, gmh, kd5
  2. Domain d4e52b1: 4e52 B:204-234 [220309]
    Other proteins in same PDB: d4e52a2, d4e52b2, d4e52c2
    automated match to d1pwba2
    complexed with ca, gmh, kd5
  3. Domain d4e52c1: 4e52 C:204-234 [220311]
    Other proteins in same PDB: d4e52a2, d4e52b2, d4e52c2
    automated match to d1pwba2
    complexed with ca, gmh, kd5
Norway rat (Rattus norvegicus), SP-A [TaxId:10116] [103651] (15 PDB entries)
1. Domain for 1r13:
  - Domain d1r13a2: 1r13 A:84-109 [96783]
    Other proteins in same PDB: d1r13a1
    complexed with ca, mes, so4
2. Domain for 1r14:
  - Domain d1r14a2: 1r14 A:84-109 [96785]
    Other proteins in same PDB: d1r14a1
    complexed with mes, sm
3. Domain for 3pak:
  - Domain d3paka1: 3pak A:84-109 [214740]
    Other proteins in same PDB: d3paka2
    automated match to d1r13a2
    complexed with ca, man, na, so4
4. Domain for 3paq:
  - Domain d3paqa1: 3paq A:84-109 [214742]
    Other proteins in same PDB: d3paqa2
    automated match to d1r13a2
    complexed with ca, mma, na, so4
5. Domain for 3par:
  - Domain d3para1: 3par A:85-109 [214744]
    Other proteins in same PDB: d3para2
    automated match to d1r13a2
    complexed with ca, so4
6. Domain for 3pbf:
  - Domain d3pbfa1: 3pbf A:84-109 [214752]
    Other proteins in same PDB: d3pbfa2
    automated match to d1r13a2
    complexed with ca, gol
7. Domain for 4wr9:
  - Domain d4wr9a1: 4wr9 A:84-109 [311798]
    Other proteins in same PDB: d4wr9a2
    automated match to d3pbfa1
    complexed with ca; mutant
8. Domain for 4wrc:
  - Domain d4wrca1: 4wrc A:89-109 [311805]
    Other proteins in same PDB: d4wrca2
    automated match to d3pbfa1
    complexed with ca, cl, hez; mutant
9. Domain for 4wre:
  - Domain d4wrea1: 4wre A:88-109 [311730]
    Other proteins in same PDB: d4wrea2
    automated match to d3pbfa1
    complexed with ca, cl, hez, ins; mutant
10. Domain for 4wrf:
  - Domain d4wrfa1: 4wrf A:87-109 [311747]
    Other proteins in same PDB: d4wrfa2
    automated match to d3pbfa1
    complexed with ca, cl, hez, man; mutant
11. Domain for 4wuw:
  - Domain d4wuwa1: 4wuw A:85-109 [311737]
    Other proteins in same PDB: d4wuwa2
    automated match to d3pbfa1
    complexed with ca, ins; mutant
12. Domain for 4wux:
  - Domain d4wuxa1: 4wux A:87-109 [311591]
    Other proteins in same PDB: d4wuxa2
    automated match to d3pbfa1
    complexed with ca, man; mutant
13. Domain for 5ffr:
  - Domain d5ffra1: 5ffr A:87-109 [319383]
    Other proteins in same PDB: d5ffra2
    automated match to d1r13a2
    complexed with ca, na, pc
14. Domain for 5ffs:
  - Domain d5ffsa1: 5ffs A:85-109 [319289]
    Other proteins in same PDB: d5ffsa2
    automated match to d3pbfa1
    complexed with ca; mutant
15. Domain for 5fft:
  - Domain d5ffta1: 5fft A:86-109 [319271]
    Other proteins in same PDB: d5ffta2
    automated match to d3pbfa1
    complexed with ca; mutant

More info for Protein Surfactant protein from h.1.1.1: Triple coiled coil domain of C-type lectins

Timeline for Protein Surfactant protein from h.1.1.1: Triple coiled coil domain of C-type lectins:

Protein Surfactant protein from h.1.1.1: Triple coiled coil domain of C-type lectins first appeared (with stable ids) in SCOP 1.55
Protein Surfactant protein from h.1.1.1: Triple coiled coil domain of C-type lectins appears in SCOPe 2.05
Protein Surfactant protein from h.1.1.1: Triple coiled coil domain of C-type lectins appears in SCOPe 2.07
Protein Surfactant protein from h.1.1.1: Triple coiled coil domain of C-type lectins appears in the current release, SCOPe 2.08