SCOPe 2.01: Family g.41.3.1: Transcriptional factor domain

Lineage for Family g.41.3.1: Transcriptional factor domain

1. Root: SCOPe 2.01

2. Class g: Small proteins [56992] (90 folds)

3. Fold g.41: Rubredoxin-like [57769] (17 superfamilies)
   metal(zinc or iron)-bound fold; sequence contains two CX(n)C motifs, in most cases n = 2

4. Superfamily g.41.3: Zinc beta-ribbon [57783] (5 families)

5. Family g.41.3.1: Transcriptional factor domain [57784] (4 proteins)

Proteins:

1. RBP9 subunit of RNA polymerase II [57787] (2 species)
   contains two differently decorated domains of this fold

   1. Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [64575] (24 PDB entries)
      Uniprot P27999; part of multichain biological unit

   2. Species Thermococcus celer [TaxId:2264] [57788] (1 PDB entry)

2. Transcription initiation factor TFIIB, N-terminal domain [57789] (2 species)

   1. Species Human (Homo sapiens) [TaxId:9606] [57791] (3 PDB entries)
      Uniprot Q00403 2-59

   2. Species Pyrococcus furiosus [TaxId:2261] [57790] (1 PDB entry)

3. Transcription initiation factor TFIIE-alpha [118283] (1 species)

   • Species Human (Homo sapiens) [TaxId:9606] [118284] (1 PDB entry)
     Uniprot P29083 113-174

4. Transcriptional factor SII, C-terminal domain [57785] (1 species)

   • Species Human (Homo sapiens) [TaxId:9606] [57786] (1 PDB entry)

More info for Family g.41.3.1: Transcriptional factor domain

Timeline for Family g.41.3.1: Transcriptional factor domain:

• Family g.41.3.1: Transcriptional factor domain first appeared (with stable ids) in SCOP 1.55
  
• Family g.41.3.1: Transcriptional factor domain appears in SCOP 1.75
  
• Family g.41.3.1: Transcriptional factor domain appears in SCOPe 2.02
  
• Family g.41.3.1: Transcriptional factor domain appears in the current release, SCOPe 2.08