Lineage for Protein: Microbial and mitochondrial ADK, insert "zinc finger" domain

  1. Root: SCOP 1.75
  2. 888632Class g: Small proteins [56992] (90 folds)
  3. 892941Fold g.41: Rubredoxin-like [57769] (17 superfamilies)
    metal(zinc or iron)-bound fold; sequence contains two CX(n)C motifs, in most cases n = 2
  4. 892957Superfamily g.41.2: Microbial and mitochondrial ADK, insert "zinc finger" domain [57774] (1 family) (S)
  5. 892958Family g.41.2.1: Microbial and mitochondrial ADK, insert "zinc finger" domain [57775] (1 protein)
  6. 892959Protein Microbial and mitochondrial ADK, insert "zinc finger" domain [57776] (8 species)

Species:

  1. 892960Bacillus globisporus [TaxId:1459] [103619] (1 PDB entry)
  2. 892962Bacillus stearothermophilus [TaxId:1422] [57777] (3 PDB entries)
    1. Domain for 1zin:
    2. Domain for 1zio:
    3. Domain for 1zip:
  3. 892966Bacillus subtilis [TaxId:1423] [103618] (1 PDB entry)
  4. 892968Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [57781] (4 PDB entries)
    contains a rudiment "zinc-finger" subdomain
    1. Domain for 1aky:
    2. Domains for 1dvr:
      1. 892972Domain d1dvra2: 1dvr A:131-168 [45200]
        Other proteins in same PDB: d1dvra1, d1dvrb1
      2. 892973Domain d1dvrb2: 1dvr B:131-168 [45201]
        Other proteins in same PDB: d1dvra1, d1dvrb1
        complexed with atf; mutant
    3. Domain for 2aky:
    4. Domain for 3aky:
  5. 892974Cow (Bos taurus), mitochondrial izozyme-2 [TaxId:9913] [57780] (2 PDB entries)
    contains a rudiment "zinc-finger" subdomain
    1. Domain for 1ak2:
    2. Domain for 2ak2:
  6. 892977Cow (Bos taurus), mitochondrial izozyme-3 [TaxId:9913] [57779] (1 PDB entry)
    contains a rudiment "zinc-finger" subdomain
  7. 892980Escherichia coli [TaxId:562] [57778] (6 PDB entries)
    contains a rudiment form of the domain that lacks zn-binding site
    1. Domains for 1ake:
      1. 892985Domain d1akea2: 1ake A:122-156 [45185]
        Other proteins in same PDB: d1akea1, d1akeb1
      2. 892986Domain d1akeb2: 1ake B:122-156 [45186]
        Other proteins in same PDB: d1akea1, d1akeb1
        complexed with ap5
    2. Domains for 1ank:
      1. 892987Domain d1anka2: 1ank A:122-156 [45187]
        Other proteins in same PDB: d1anka1, d1ankb1
      2. 892988Domain d1ankb2: 1ank B:122-156 [45188]
        Other proteins in same PDB: d1anka1, d1ankb1
        complexed with amp, anp
    3. Domains for 1e4v:
      1. 892981Domain d1e4va2: 1e4v A:122-156 [45183]
        Other proteins in same PDB: d1e4va1, d1e4vb1
      2. 892982Domain d1e4vb2: 1e4v B:122-156 [45184]
        Other proteins in same PDB: d1e4va1, d1e4vb1
        complexed with ap5; mutant
    4. Domains for 1e4y:
      1. 892983Domain d1e4ya2: 1e4y A:122-156 [45181]
        Other proteins in same PDB: d1e4ya1, d1e4yb1
      2. 892984Domain d1e4yb2: 1e4y B:122-156 [45182]
        Other proteins in same PDB: d1e4ya1, d1e4yb1
        complexed with ap5; mutant
    5. Domains for 2eck:
      1. 892991Domain d2ecka2: 2eck A:122-156 [45191]
        Other proteins in same PDB: d2ecka1, d2eckb1
      2. 892992Domain d2eckb2: 2eck B:122-156 [45192]
        Other proteins in same PDB: d2ecka1, d2eckb1
        complexed with adp, amp
    6. Domains for 4ake:
      1. 892989Domain d4akea2: 4ake A:122-156 [45189]
        Other proteins in same PDB: d4akea1, d4akeb1
      2. 892990Domain d4akeb2: 4ake B:122-156 [45190]
        Other proteins in same PDB: d4akea1, d4akeb1
  8. 892993Maize (Zea mays) [TaxId:4577] [57782] (1 PDB entry)

More info for Protein Microbial and mitochondrial ADK, insert "zinc finger" domain from g.41.2.1: Microbial and mitochondrial ADK, insert "zinc finger" domain

Timeline for Protein Microbial and mitochondrial ADK, insert "zinc finger" domain from g.41.2.1: Microbial and mitochondrial ADK, insert "zinc finger" domain:

  • Protein Microbial and mitochondrial ADK, insert "zinc finger" domain from g.41.2.1: Microbial and mitochondrial ADK, insert "zinc finger" domain first appeared (with stable ids) in SCOP 1.55
  • Protein Microbial and mitochondrial ADK, insert "zinc finger" domain from g.41.2.1: Microbial and mitochondrial ADK, insert "zinc finger" domain appears in SCOP 1.73
  • Protein Microbial and mitochondrial ADK, insert "zinc finger" domain from g.41.2.1: Microbial and mitochondrial ADK, insert "zinc finger" domain appears in SCOPe 2.01
  • Protein Microbial and mitochondrial ADK, insert "zinc finger" domain from g.41.2.1: Microbial and mitochondrial ADK, insert "zinc finger" domain appears in the current release, SCOPe 2.07