Lineage for Protein: Microbial and mitochondrial ADK, insert "zinc finger" domain

  1. Root: SCOP 1.73
  2. 746751Class g: Small proteins [56992] (85 folds)
  3. 750692Fold g.41: Rubredoxin-like [57769] (16 superfamilies)
    metal(zinc or iron)-bound fold; sequence contains two CX(n)C motifs, in most cases n = 2
  4. 750708Superfamily g.41.2: Microbial and mitochondrial ADK, insert "zinc finger" domain [57774] (1 family) (S)
  5. 750709Family g.41.2.1: Microbial and mitochondrial ADK, insert "zinc finger" domain [57775] (1 protein)
  6. 750710Protein Microbial and mitochondrial ADK, insert "zinc finger" domain [57776] (8 species)

Species:

  1. 750711Bacillus globisporus [TaxId:1459] [103619] (1 PDB entry)
  2. 750713Bacillus stearothermophilus [TaxId:1422] [57777] (3 PDB entries)
    1. Domain for 1zin:
    2. Domain for 1zio:
    3. Domain for 1zip:
  3. 750717Bacillus subtilis [TaxId:1423] [103618] (1 PDB entry)
  4. 750719Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [57781] (4 PDB entries)
    contains a rudiment "zinc-finger" subdomain
    1. Domain for 1aky:
    2. Domains for 1dvr:
      1. 750723Domain d1dvra2: 1dvr A:131-168 [45200]
        Other proteins in same PDB: d1dvra1, d1dvrb1
      2. 750724Domain d1dvrb2: 1dvr B:131-168 [45201]
        Other proteins in same PDB: d1dvra1, d1dvrb1
        complexed with atf; mutant
    3. Domain for 2aky:
    4. Domain for 3aky:
  5. 750725Cow (Bos taurus), mitochondrial izozyme-2 [TaxId:9913] [57780] (2 PDB entries)
    contains a rudiment "zinc-finger" subdomain
    1. Domain for 1ak2:
    2. Domain for 2ak2:
  6. 750728Cow (Bos taurus), mitochondrial izozyme-3 [TaxId:9913] [57779] (1 PDB entry)
    contains a rudiment "zinc-finger" subdomain
  7. 750731Escherichia coli [TaxId:562] [57778] (6 PDB entries)
    contains a rudiment form of the domain that lacks zn-binding site
    1. Domains for 1ake:
      1. 750736Domain d1akea2: 1ake A:122-156 [45185]
        Other proteins in same PDB: d1akea1, d1akeb1
      2. 750737Domain d1akeb2: 1ake B:122-156 [45186]
        Other proteins in same PDB: d1akea1, d1akeb1
        complexed with ap5
    2. Domains for 1ank:
      1. 750738Domain d1anka2: 1ank A:122-156 [45187]
        Other proteins in same PDB: d1anka1, d1ankb1
      2. 750739Domain d1ankb2: 1ank B:122-156 [45188]
        Other proteins in same PDB: d1anka1, d1ankb1
        complexed with amp, anp
    3. Domains for 1e4v:
      1. 750734Domain d1e4va2: 1e4v A:122-156 [45183]
        Other proteins in same PDB: d1e4va1, d1e4vb1
      2. 750735Domain d1e4vb2: 1e4v B:122-156 [45184]
        Other proteins in same PDB: d1e4va1, d1e4vb1
        complexed with ap5; mutant
    4. Domains for 1e4y:
      1. 750732Domain d1e4ya2: 1e4y A:122-156 [45181]
        Other proteins in same PDB: d1e4ya1, d1e4yb1
      2. 750733Domain d1e4yb2: 1e4y B:122-156 [45182]
        Other proteins in same PDB: d1e4ya1, d1e4yb1
        complexed with ap5; mutant
    5. Domains for 2eck:
      1. 750742Domain d2ecka2: 2eck A:122-156 [45191]
        Other proteins in same PDB: d2ecka1, d2eckb1
      2. 750743Domain d2eckb2: 2eck B:122-156 [45192]
        Other proteins in same PDB: d2ecka1, d2eckb1
        complexed with adp, amp
    6. Domains for 4ake:
      1. 750740Domain d4akea2: 4ake A:122-156 [45189]
        Other proteins in same PDB: d4akea1, d4akeb1
      2. 750741Domain d4akeb2: 4ake B:122-156 [45190]
        Other proteins in same PDB: d4akea1, d4akeb1
  8. 750744Maize (Zea mays) [TaxId:4577] [57782] (1 PDB entry)

More info for Protein Microbial and mitochondrial ADK, insert "zinc finger" domain from g.41.2.1: Microbial and mitochondrial ADK, insert "zinc finger" domain

Timeline for Protein Microbial and mitochondrial ADK, insert "zinc finger" domain from g.41.2.1: Microbial and mitochondrial ADK, insert "zinc finger" domain:

  • Protein Microbial and mitochondrial ADK, insert "zinc finger" domain from g.41.2.1: Microbial and mitochondrial ADK, insert "zinc finger" domain first appeared (with stable ids) in SCOP 1.55
  • Protein Microbial and mitochondrial ADK, insert "zinc finger" domain from g.41.2.1: Microbial and mitochondrial ADK, insert "zinc finger" domain appears in SCOP 1.71
  • Protein Microbial and mitochondrial ADK, insert "zinc finger" domain from g.41.2.1: Microbial and mitochondrial ADK, insert "zinc finger" domain appears in SCOP 1.75
  • Protein Microbial and mitochondrial ADK, insert "zinc finger" domain from g.41.2.1: Microbial and mitochondrial ADK, insert "zinc finger" domain appears in the current release, SCOPe 2.07