SCOPe 2.07: Species: African clawed frog (Xenopus laevis) [TaxId: 8355]

Lineage for Species: African clawed frog (Xenopus laevis) [TaxId: 8355]

Root: SCOPe 2.07
Class g: Small proteins [56992] (98 folds)

Fold g.37: beta-beta-alpha zinc fingers [57666] (1 superfamily)
simple fold, consisting of the N-terminal beta-hairpin and C-terminal alpha-helical region; each part provides two zinc-coordinating residues with the observed sequences including C2H2, C2HC and CHHC

Superfamily g.37.1: beta-beta-alpha zinc fingers [57667] (8 families)
Family g.37.1.1: Classic zinc finger, C2H2 [57668] (31 proteins)
Protein Transcription factor IIIA, TFIIIA [57693] (1 species)
duplication: consists of 6 fingers
Species African clawed frog (Xenopus laevis) [TaxId:8355] [57694] (4 PDB entries)

PDB entries in Species: African clawed frog (Xenopus laevis) [TaxId: 8355]:

Domain(s) for 1tf3:
1. Domain d1tf3a1: 1tf3 A:1-40 [45057]
  fingers 1-3
  protein/DNA complex; protein/RNA complex; complexed with zn
2. Domain d1tf3a2: 1tf3 A:41-70 [45058]
  fingers 1-3
  protein/DNA complex; protein/RNA complex; complexed with zn
3. Domain d1tf3a3: 1tf3 A:71-101 [45059]
  fingers 1-3
  protein/DNA complex; protein/RNA complex; complexed with zn
Domain(s) for 1tf6:
1. Domain d1tf6a1: 1tf6 A:10-40 [45060]
  protein/DNA complex; protein/RNA complex; complexed with zn
2. Domain d1tf6a2: 1tf6 A:41-70 [45061]
  protein/DNA complex; protein/RNA complex; complexed with zn
3. Domain d1tf6a3: 1tf6 A:71-100 [45062]
  protein/DNA complex; protein/RNA complex; complexed with zn
4. Domain d1tf6a4: 1tf6 A:101-131 [45063]
  protein/DNA complex; protein/RNA complex; complexed with zn
5. Domain d1tf6a5: 1tf6 A:132-160 [45064]
  protein/DNA complex; protein/RNA complex; complexed with zn
6. Domain d1tf6a6: 1tf6 A:161-188 [45065]
  protein/DNA complex; protein/RNA complex; complexed with zn
7. Domain d1tf6d1: 1tf6 D:7-40 [45066]
  protein/DNA complex; protein/RNA complex; complexed with zn
8. Domain d1tf6d2: 1tf6 D:41-70 [45067]
  protein/DNA complex; protein/RNA complex; complexed with zn
9. Domain d1tf6d3: 1tf6 D:71-100 [45068]
  protein/DNA complex; protein/RNA complex; complexed with zn
10. Domain d1tf6d4: 1tf6 D:101-131 [45069]
  protein/DNA complex; protein/RNA complex; complexed with zn
11. Domain d1tf6d5: 1tf6 D:132-160 [45070]
  protein/DNA complex; protein/RNA complex; complexed with zn
12. Domain d1tf6d6: 1tf6 D:161-188 [45071]
  protein/DNA complex; protein/RNA complex; complexed with zn
Domain(s) for 1un6:
1. Domain d1un6b1: 1un6 B:104-131 [99649]
  protein/DNA complex; protein/RNA complex; complexed with mg, zn
2. Domain d1un6b2: 1un6 B:132-160 [99650]
  protein/DNA complex; protein/RNA complex; complexed with mg, zn
3. Domain d1un6b3: 1un6 B:161-190 [99651]
  protein/DNA complex; protein/RNA complex; complexed with mg, zn
4. Domain d1un6c1: 1un6 C:104-131 [99652]
  protein/DNA complex; protein/RNA complex; complexed with mg, zn
5. Domain d1un6c2: 1un6 C:132-160 [99653]
  protein/DNA complex; protein/RNA complex; complexed with mg, zn
6. Domain d1un6c3: 1un6 C:161-190 [99654]
  protein/DNA complex; protein/RNA complex; complexed with mg, zn
7. Domain d1un6d1: 1un6 D:133-160 [99655]
  protein/DNA complex; protein/RNA complex; complexed with mg, zn
8. Domain d1un6d2: 1un6 D:161-190 [99656]
  protein/DNA complex; protein/RNA complex; complexed with mg, zn
Domain(s) for 2hgh:
1. Domain d2hgha1: 2hgh A:104-131 [136396]
  automatically matched to d1un6b1
  protein/RNA complex; complexed with zn
2. Domain d2hgha2: 2hgh A:132-160 [136397]
  automatically matched to d1tf6a5
  protein/RNA complex; complexed with zn
3. Domain d2hgha3: 2hgh A:161-190 [136398]
  automatically matched to d1un6b3
  protein/RNA complex; complexed with zn

More info for Species African clawed frog (Xenopus laevis) [TaxId:8355] from g.37.1.1 Transcription factor IIIA, TFIIIA

Timeline for Species African clawed frog (Xenopus laevis) [TaxId:8355] from g.37.1.1 Transcription factor IIIA, TFIIIA:

Species African clawed frog (Xenopus laevis) [TaxId:8355] from g.37.1.1 Transcription factor IIIA, TFIIIA first appeared (with stable ids) in SCOP 1.55, called Species Xenopus laevis [TaxId:8355] from g.37.1.1 Transcription factor IIIA, TFIIIA
Species African clawed frog (Xenopus laevis) [TaxId:8355] from g.37.1.1 Transcription factor IIIA, TFIIIA appears in SCOPe 2.06
Species African clawed frog (Xenopus laevis) [TaxId:8355] from g.37.1.1 Transcription factor IIIA, TFIIIA appears in the current release, SCOPe 2.08