SCOPe 2.01: Protein: Transcription factor IIIA, TFIIIA

Lineage for Protein: Transcription factor IIIA, TFIIIA

Root: SCOPe 2.01
Class g: Small proteins [56992] (90 folds)

Fold g.37: beta-beta-alpha zinc fingers [57666] (1 superfamily)
simple fold, consisting of the N-terminal beta-hairpin and C-terminal alpha-helical region; each part provides two zinc-coordinating residues with the observed sequences including C2H2, C2HC and CHHC

Superfamily g.37.1: beta-beta-alpha zinc fingers [57667] (7 families)
Family g.37.1.1: Classic zinc finger, C2H2 [57668] (30 proteins)
Protein Transcription factor IIIA, TFIIIA [57693] (1 species)
duplication: consists of 6 fingers

Species:

African clawed frog (Xenopus laevis) [TaxId:8355] [57694] (5 PDB entries)
1. Domains for 1tf3:
  1. Domain d1tf3a1: 1tf3 A:1-40 [45057]
    fingers 1-3
    protein/DNA complex; protein/RNA complex; complexed with zn
  2. Domain d1tf3a2: 1tf3 A:41-70 [45058]
    fingers 1-3
    protein/DNA complex; protein/RNA complex; complexed with zn
  3. Domain d1tf3a3: 1tf3 A:71-101 [45059]
    fingers 1-3
    protein/DNA complex; protein/RNA complex; complexed with zn
2. Domains for 1tf6:
  1. Domain d1tf6a1: 1tf6 A:10-40 [45060]
    protein/DNA complex; protein/RNA complex; complexed with zn
  2. Domain d1tf6a2: 1tf6 A:41-70 [45061]
    protein/DNA complex; protein/RNA complex; complexed with zn
  3. Domain d1tf6a3: 1tf6 A:71-100 [45062]
    protein/DNA complex; protein/RNA complex; complexed with zn
  4. Domain d1tf6a4: 1tf6 A:101-131 [45063]
    protein/DNA complex; protein/RNA complex; complexed with zn
  5. Domain d1tf6a5: 1tf6 A:132-160 [45064]
    protein/DNA complex; protein/RNA complex; complexed with zn
  6. Domain d1tf6a6: 1tf6 A:161-188 [45065]
    protein/DNA complex; protein/RNA complex; complexed with zn
  7. Domain d1tf6d1: 1tf6 D:7-40 [45066]
    protein/DNA complex; protein/RNA complex; complexed with zn
  8. Domain d1tf6d2: 1tf6 D:41-70 [45067]
    protein/DNA complex; protein/RNA complex; complexed with zn
  9. Domain d1tf6d3: 1tf6 D:71-100 [45068]
    protein/DNA complex; protein/RNA complex; complexed with zn
  10. Domain d1tf6d4: 1tf6 D:101-131 [45069]
    protein/DNA complex; protein/RNA complex; complexed with zn
  11. Domain d1tf6d5: 1tf6 D:132-160 [45070]
    protein/DNA complex; protein/RNA complex; complexed with zn
  12. Domain d1tf6d6: 1tf6 D:161-188 [45071]
    protein/DNA complex; protein/RNA complex; complexed with zn
3. Domains for 1un6:
  1. Domain d1un6b1: 1un6 B:104-131 [99649]
    protein/DNA complex; protein/RNA complex; complexed with mg, zn
  2. Domain d1un6b2: 1un6 B:132-160 [99650]
    protein/DNA complex; protein/RNA complex; complexed with mg, zn
  3. Domain d1un6b3: 1un6 B:161-190 [99651]
    protein/DNA complex; protein/RNA complex; complexed with mg, zn
  4. Domain d1un6c1: 1un6 C:104-131 [99652]
    protein/DNA complex; protein/RNA complex; complexed with mg, zn
  5. Domain d1un6c2: 1un6 C:132-160 [99653]
    protein/DNA complex; protein/RNA complex; complexed with mg, zn
  6. Domain d1un6c3: 1un6 C:161-190 [99654]
    protein/DNA complex; protein/RNA complex; complexed with mg, zn
  7. Domain d1un6d1: 1un6 D:133-160 [99655]
    protein/DNA complex; protein/RNA complex; complexed with mg, zn
  8. Domain d1un6d2: 1un6 D:161-190 [99656]
    protein/DNA complex; protein/RNA complex; complexed with mg, zn
4. Domains for 2hgh:
  1. Domain d2hgha1: 2hgh A:104-131 [136396]
    automatically matched to d1un6b1
    protein/RNA complex; complexed with zn
  2. Domain d2hgha2: 2hgh A:132-160 [136397]
    automatically matched to d1tf6a5
    protein/RNA complex; complexed with zn
  3. Domain d2hgha3: 2hgh A:161-190 [136398]
    automatically matched to d1un6b3
    protein/RNA complex; complexed with zn
5. Domains for 2j7j:
  1. Domain d2j7ja1: 2j7j A:1-28 [147903]
    automatically matched to d1un6b1
    protein/DNA complex; protein/RNA complex; complexed with so4, zn
  2. Domain d2j7ja2: 2j7j A:29-57 [147904]
    automatically matched to d1tf6a5
    protein/DNA complex; protein/RNA complex; complexed with so4, zn
  3. Domain d2j7ja3: 2j7j A:58-85 [147905]
    automatically matched to d1un6b3
    protein/DNA complex; protein/RNA complex; complexed with so4, zn

More info for Protein Transcription factor IIIA, TFIIIA from g.37.1.1: Classic zinc finger, C2H2

Timeline for Protein Transcription factor IIIA, TFIIIA from g.37.1.1: Classic zinc finger, C2H2:

Protein Transcription factor IIIA, TFIIIA from g.37.1.1: Classic zinc finger, C2H2 first appeared (with stable ids) in SCOP 1.55
Protein Transcription factor IIIA, TFIIIA from g.37.1.1: Classic zinc finger, C2H2 appears in SCOP 1.75
Protein Transcription factor IIIA, TFIIIA from g.37.1.1: Classic zinc finger, C2H2 appears in SCOPe 2.02
Protein Transcription factor IIIA, TFIIIA from g.37.1.1: Classic zinc finger, C2H2 appears in the current release, SCOPe 2.08