Lineage for Protein: Factor IX (IXa)

  1. Root: SCOPe 2.01
  2. 1061255Class g: Small proteins [56992] (90 folds)
  3. 1061532Fold g.3: Knottins (small inhibitors, toxins, lectins) [57015] (19 superfamilies)
    disulfide-bound fold; contains beta-hairpin with two adjacent disulfides
  4. 1062283Superfamily g.3.11: EGF/Laminin [57196] (7 families) (S)
  5. 1062284Family g.3.11.1: EGF-type module [57197] (23 proteins)
  6. 1062362Protein Factor IX (IXa) [57198] (2 species)

Species:

  1. 1062363Human (Homo sapiens) [TaxId:9606] [57199] (8 PDB entries)
    1. Domains for 1edm:
      1. 1062364Domain d1edmb_: 1edm B: [44203]
        complexed with ca
      2. 1062365Domain d1edmc_: 1edm C: [44204]
        complexed with ca
    2. Domain for 1ixa:
    3. Domain for 1rfn:
    4. Domains for 2ec9:
      1. 1062369Domain d2ec9l1: 2ec9 L:46-82 [146786]
        Other proteins in same PDB: d2ec9h_, d2ec9l3, d2ec9u_
        automatically matched to d1pfxl1
        complexed with 24x, aso, ca, fuc
      2. 1062370Domain d2ec9l2: 2ec9 L:91-140 [146787]
        Other proteins in same PDB: d2ec9h_, d2ec9l3, d2ec9u_
        automatically matched to d1pfxl2
        complexed with 24x, aso, ca, fuc
    5. Domains for 2zp0:
      1. 1062371Domain d2zp0l1: 2zp0 L:46-82 [154745]
        Other proteins in same PDB: d2zp0h_, d2zp0l3, d2zp0t1, d2zp0t2
        automatically matched to d1pfxl1
        complexed with bgc, ca, fuc, pi0
      2. 1062372Domain d2zp0l2: 2zp0 L:91-140 [154746]
        Other proteins in same PDB: d2zp0h_, d2zp0l3, d2zp0t1, d2zp0t2
        automatically matched to d1pfxl2
        complexed with bgc, ca, fuc, pi0
    6. Domain for 3kcg:
    7. Domains for 3lc3:
      1. 1062367Domain d3lc3b_: 3lc3 B: [180172]
        Other proteins in same PDB: d3lc3a_, d3lc3c_
        automated match to d1rfnb_
        complexed with ca, iyx
      2. 1062368Domain d3lc3d_: 3lc3 D: [180174]
        Other proteins in same PDB: d3lc3a_, d3lc3c_
        automated match to d1rfnb_
        complexed with ca, iyx
    8. Domain for 3lc5:
  2. 1062376Pig (Sus scrofa) [TaxId:9823] [57200] (16 PDB entries)
    1. Domains for 1pfx:
      1. 1062405Domain d1pfxl1: 1pfx L:47-86 [44207]
        Other proteins in same PDB: d1pfxc_, d1pfxl3
      2. 1062406Domain d1pfxl2: 1pfx L:87-146 [44208]
        Other proteins in same PDB: d1pfxc_, d1pfxl3
    2. Domains for 1w0y:
      1. 1062391Domain d1w0yl1: 1w0y L:46-82 [120568]
        Other proteins in same PDB: d1w0yh_, d1w0yl3, d1w0yt1, d1w0yt2
        automatically matched to d1pfxl1
        complexed with 771, bgc, ca, cac, fuc
      2. 1062392Domain d1w0yl2: 1w0y L:91-140 [120569]
        Other proteins in same PDB: d1w0yh_, d1w0yl3, d1w0yt1, d1w0yt2
        automatically matched to d1pfxl2
        complexed with 771, bgc, ca, cac, fuc
    3. Domains for 1w2k:
      1. 1062401Domain d1w2kl1: 1w2k L:46-82 [120585]
        Other proteins in same PDB: d1w2kh1, d1w2kl3, d1w2kt1, d1w2kt2
        automatically matched to d1pfxl1
        complexed with 380, bgc, ca, cac, fuc
      2. 1062402Domain d1w2kl2: 1w2k L:91-140 [120586]
        Other proteins in same PDB: d1w2kh1, d1w2kl3, d1w2kt1, d1w2kt2
        automatically matched to d1pfxl2
        complexed with 380, bgc, ca, cac, fuc
    4. Domains for 1wqv:
      1. 1062393Domain d1wqvl1: 1wqv L:46-82 [121174]
        Other proteins in same PDB: d1wqvh_, d1wqvl3, d1wqvt1, d1wqvt2
        automatically matched to d1pfxl1
        complexed with bgc, ca, fuc, psm
      2. 1062394Domain d1wqvl2: 1wqv L:91-140 [121175]
        Other proteins in same PDB: d1wqvh_, d1wqvl3, d1wqvt1, d1wqvt2
        automatically matched to d1pfxl2
        complexed with bgc, ca, fuc, psm
    5. Domains for 1wss:
      1. 1062395Domain d1wssl1: 1wss L:46-82 [121239]
        Other proteins in same PDB: d1wssh_, d1wssl3, d1wsst1, d1wsst2
        automatically matched to d1pfxl1
        complexed with 3cb, bgc, ca, fuc
      2. 1062396Domain d1wssl2: 1wss L:91-140 [121240]
        Other proteins in same PDB: d1wssh_, d1wssl3, d1wsst1, d1wsst2
        automatically matched to d1pfxl2
        complexed with 3cb, bgc, ca, fuc
    6. Domains for 1wtg:
      1. 1062387Domain d1wtgl1: 1wtg L:46-82 [121263]
        Other proteins in same PDB: d1wtgh_, d1wtgl3, d1wtgt1, d1wtgt2
        automatically matched to d1pfxl1
        complexed with 3bp, bgc, ca, fuc
      2. 1062388Domain d1wtgl2: 1wtg L:91-140 [121264]
        Other proteins in same PDB: d1wtgh_, d1wtgl3, d1wtgt1, d1wtgt2
        automatically matched to d1pfxl2
        complexed with 3bp, bgc, ca, fuc
    7. Domains for 1wun:
      1. 1062389Domain d1wunl1: 1wun L:46-82 [121299]
        Other proteins in same PDB: d1wunh_, d1wunl3, d1wunt1, d1wunt2
        automatically matched to d1pfxl1
        complexed with bgc, ca, fuc, p5b
      2. 1062390Domain d1wunl2: 1wun L:91-140 [121300]
        Other proteins in same PDB: d1wunh_, d1wunl3, d1wunt1, d1wunt2
        automatically matched to d1pfxl2
        complexed with bgc, ca, fuc, p5b
    8. Domains for 1wv7:
      1. 1062399Domain d1wv7l1: 1wv7 L:46-82 [121321]
        Other proteins in same PDB: d1wv7h_, d1wv7l3, d1wv7t1, d1wv7t2
        automatically matched to d1pfxl1
        complexed with 5pi, bgc, ca, fuc
      2. 1062400Domain d1wv7l2: 1wv7 L:91-140 [121322]
        Other proteins in same PDB: d1wv7h_, d1wv7l3, d1wv7t1, d1wv7t2
        automatically matched to d1pfxl2
        complexed with 5pi, bgc, ca, fuc
    9. Domains for 1x7a:
      1. 1062407Domain d1x7al1: 1x7a L:50-86 [121782]
        Other proteins in same PDB: d1x7ac_
        automatically matched to d1pfxl1
        complexed with 187
      2. 1062408Domain d1x7al2: 1x7a L:87-146 [121783]
        Other proteins in same PDB: d1x7ac_
        automatically matched to d1pfxl2
        complexed with 187
    10. Domains for 1z6j:
      1. 1062385Domain d1z6jl1: 1z6j L:46-82 [124524]
        Other proteins in same PDB: d1z6jh_, d1z6jl3, d1z6jt1, d1z6jt2
        automatically matched to d1pfxl1
        complexed with ca, mg, py3
      2. 1062386Domain d1z6jl2: 1z6j L:91-140 [124525]
        Other proteins in same PDB: d1z6jh_, d1z6jl3, d1z6jt1, d1z6jt2
        automatically matched to d1pfxl2
        complexed with ca, mg, py3
    11. Domains for 2a2q:
      1. 1062379Domain d2a2ql1: 2a2q L:46-82 [126053]
        Other proteins in same PDB: d2a2qh_, d2a2ql3, d2a2qt1, d2a2qt2
        automatically matched to d1pfxl1
        complexed with ca, cl, fuc, glc, mg, na, pbz, zn
      2. 1062380Domain d2a2ql2: 2a2q L:91-140 [126054]
        Other proteins in same PDB: d2a2qh_, d2a2ql3, d2a2qt1, d2a2qt2
        automatically matched to d1pfxl2
        complexed with ca, cl, fuc, glc, mg, na, pbz, zn
    12. Domains for 2aei:
      1. 1062397Domain d2aeil1: 2aei L:46-82 [126632]
        Other proteins in same PDB: d2aeih_, d2aeil3, d2aeit1, d2aeit2
        automatically matched to d1pfxl1
        complexed with 03r, ca, cac
      2. 1062398Domain d2aeil2: 2aei L:91-140 [126633]
        Other proteins in same PDB: d2aeih_, d2aeil3, d2aeit1, d2aeit2
        automatically matched to d1pfxl2
        complexed with 03r, ca, cac
    13. Domains for 2aer:
      1. 1062381Domain d2aerl1: 2aer L:46-82 [126641]
        Other proteins in same PDB: d2aerh_, d2aerl3, d2aert1, d2aert2
        automatically matched to d1pfxl1
        complexed with ben, ca, cl, fuc, glc, mg, na, zn
      2. 1062382Domain d2aerl2: 2aer L:91-140 [126642]
        Other proteins in same PDB: d2aerh_, d2aerl3, d2aert1, d2aert2
        automatically matched to d1pfxl2
        complexed with ben, ca, cl, fuc, glc, mg, na, zn
    14. Domains for 2b8o:
      1. 1062403Domain d2b8ol1: 2b8o L:46-82 [128096]
        Other proteins in same PDB: d2b8oh_, d2b8ol3, d2b8ot1, d2b8ot2
        automatically matched to d1pfxl1
        complexed with 0gj, ca, cl, fuc, glc, mg, na, zn
      2. 1062404Domain d2b8ol2: 2b8o L:91-140 [128097]
        Other proteins in same PDB: d2b8oh_, d2b8ol3, d2b8ot1, d2b8ot2
        automatically matched to d1pfxl2
        complexed with 0gj, ca, cl, fuc, glc, mg, na, zn
    15. Domains for 2c4f:
      1. 1062377Domain d2c4fl1: 2c4f L:46-82 [129806]
        Other proteins in same PDB: d2c4fh1, d2c4fl3, d2c4fu1
        automatically matched to d1pfxl1
        complexed with ca, fuc, gil, glc, nag
      2. 1062378Domain d2c4fl2: 2c4f L:91-140 [129807]
        Other proteins in same PDB: d2c4fh1, d2c4fl3, d2c4fu1
        automatically matched to d1pfxl2
        complexed with ca, fuc, gil, glc, nag
    16. Domains for 2fir:
      1. 1062383Domain d2firl1: 2fir L:46-82 [133532]
        Other proteins in same PDB: d2firh_, d2firl3, d2firt1, d2firt2
        automatically matched to d1pfxl1
        complexed with 0g7, ca, cl, fuc, glc, mg, na, zn
      2. 1062384Domain d2firl2: 2fir L:91-140 [133533]
        Other proteins in same PDB: d2firh_, d2firl3, d2firt1, d2firt2
        automatically matched to d1pfxl2
        complexed with 0g7, ca, cl, fuc, glc, mg, na, zn

More info for Protein Factor IX (IXa) from g.3.11.1: EGF-type module

Timeline for Protein Factor IX (IXa) from g.3.11.1: EGF-type module: