SCOPe 2.08: Family g.3.7.5: Plant defensins

Lineage for Family g.3.7.5: Plant defensins

1. Root: SCOPe 2.08

2. Class g: Small proteins [56992] (100 folds)

3. Fold g.3: Knottins (small inhibitors, toxins, lectins) [57015] (19 superfamilies)
   disulfide-bound fold; contains beta-hairpin with two adjacent disulfides

4. Superfamily g.3.7: Scorpion toxin-like [57095] (6 families)

5. Family g.3.7.5: Plant defensins [57170] (9 proteins)

Proteins:

1. Antifungal protein 1 (RS-AFP1) [57174] (1 species)

   • Species Radish (Raphanus sativus) [TaxId:3726] [57175] (1 PDB entry)

2. Antimicrobial protein 1 (AH-AMP1) [57176] (1 species)

   • Species Horse chestnut (Aesculus hippocastanum) [TaxId:43364] [57177] (1 PDB entry)

3. Brazzein [57178] (1 species)
   sweet protein

   • Species J'oublie (Pentadiplandra brazzeana) [TaxId:43545] [57179] (6 PDB entries)

4. Defensin 1 (PSD1) [69937] (1 species)

   • Species Pea (Pisum sativum) [TaxId:3888] [69938] (1 PDB entry)

5. Floral defensin 1 [103556] (3 species)
   flower-specific gamma-thionin

   1. Species Garden petunia (Petunia x hybrida), PHD1 [TaxId:4102] [103558] (1 PDB entry)

   2. Species Tobacco (Nicotiana tabacum), NAD1 [TaxId:4097] [103557] (1 PDB entry)

   3. Species Winged tobacco (Nicotiana alata) [TaxId:4087] [192452] (3 PDB entries)

6. gamma-Thionin [57171] (2 species)

   1. Species Barley (Hordeum vulgare) [TaxId:4513] [57172] (1 PDB entry)

   2. Species English wheat (Triticum turgidum) [TaxId:4571] [57173] (1 PDB entry)

7. S-locus pollen protein [103559] (1 species)

   • Species Turnip (Brassica rapa) [TaxId:3711] [103560] (1 PDB entry)

8. Trypsin/chymotrypsin inhibitor ATT [82885] (1 species)

   • Species Thale cress (Arabidopsis thaliana) [TaxId:3702] [82886] (1 PDB entry)

9. automated matches [191215] (13 species)
   not a true protein

   1. Species Arabidopsis halleri [TaxId:81970] [256412] (1 PDB entry)

   2. Species French bean (Phaseolus vulgaris) [TaxId:3885] [392778] (1 PDB entry)

   3. Species J'oublie (Pentadiplandra brazzeana) [TaxId:43545] [255389] (3 PDB entries)

   4. Species Lens culinaris [TaxId:362247] [255440] (1 PDB entry)

   5. Species Mung bean (Vigna radiata) [TaxId:157791] [255190] (1 PDB entry)

   6. Species Nicotiana occidentalis [TaxId:200313] [368181] (1 PDB entry)

   7. Species Nicotiana suaveolens [TaxId:157071] [323676] (1 PDB entry)

   8. Species Nicotiana suaveolens [TaxId:200320] [337270] (1 PDB entry)

   9. Species Pachyrhizus erosus [TaxId:109171] [189587] (1 PDB entry)

   10. Species Pea (Pisum sativum) [TaxId:3888] [373199] (1 PDB entry)

   11. Species Radish (Raphanus sativus) [TaxId:3726] [317857] (1 PDB entry)

   12. Species Solanum lycopersicum [TaxId:4081] [271521] (1 PDB entry)

   13. Species Winged tobacco (Nicotiana alata) [TaxId:4087] [352351] (1 PDB entry)

More info for Family g.3.7.5: Plant defensins

Timeline for Family g.3.7.5: Plant defensins:

• Family g.3.7.5: Plant defensins first appeared (with stable ids) in SCOP 1.55
  
• Family g.3.7.5: Plant defensins appears in SCOPe 2.07