Lineage for Protein: Porin

  1. Root: SCOPe 2.07
  2. 2626587Class f: Membrane and cell surface proteins and peptides [56835] (60 folds)
  3. 2627486Fold f.4: Transmembrane beta-barrels [56924] (7 superfamilies)
    not a true fold, gathers together transmembrane barrels of different (n,S)
  4. 2627626Superfamily f.4.3: Porins [56935] (5 families) (S)
  5. 2627627Family f.4.3.1: Porin [56936] (2 proteins)
    trimer, one subunit folds into (16,20) barrel
  6. 2627628Protein Porin [56937] (5 species)

Species:

  1. 2627629Comamonas acidovorans [TaxId:80866] [64534] (1 PDB entry)
    Anion-selective porin OMP32
    • Domain for 1e54:
      • 2627630Domain d1e54a_: 1e54 A: [59258]
        complexed with a periplasmic peptide, chain B
        complexed with ca, so4
  2. 2627631Escherichia coli, different sequences [TaxId:562] [56938] (29 PDB entries)
    1. Domain for 1bt9:
    2. Domain for 1gfm:
    3. Domain for 1gfn:
    4. Domain for 1gfo:
    5. Domain for 1gfp:
    6. Domain for 1gfq:
    7. Domain for 1hxt:
    8. Domain for 1hxu:
    9. Domain for 1hxx:
    10. Domain for 1mpf:
    11. Domains for 1opf:
      1. 2627674Domain d1opfa_: 1opf A: [43757]
      2. 2627675Domain d1opfb_: 1opf B: [118573]
        duplicate of 1OPF
      3. 2627676Domain d1opfc_: 1opf C: [118574]
        duplicate of 1OPF
      4. 2627677Domain d1opfd_: 1opf D: [118575]
        duplicate of 1OPF
      5. 2627678Domain d1opfe_: 1opf E: [118576]
        duplicate of 1OPF
      6. 2627679Domain d1opff_: 1opf F: [118577]
        duplicate of 1OPF
    12. Domain for 1pho:
    13. Domain for 2omf:
    14. Domain for 2zfg:
    15. Domains for 2zld:
      1. 2627680Domain d2zlda_: 2zld A: [154630]
        automated match to d1hxua_
      2. 2627681Domain d2zldb_: 2zld B: [154631]
        automated match to d1hxua_
    16. Domains for 3hw9:
      1. 2627661Domain d3hw9a_: 3hw9 A: [211313]
        automated match to d3nsgc_
        complexed with cl, k, p6g
      2. 2627662Domain d3hw9b_: 3hw9 B: [211314]
        automated match to d3nsgc_
        complexed with cl, k, p6g
    17. Domains for 3hwb:
      1. 2627670Domain d3hwba_: 3hwb A: [246601]
        automated match to d1hxua_
        complexed with p6g, rb
      2. 2627671Domain d3hwbb_: 3hwb B: [246602]
        automated match to d1hxua_
        complexed with p6g, rb
    18. Domain for 3poq:
    19. Domain for 3pou:
    20. Domains for 3pox:
      1. 2627635Domain d3poxa_: 3pox A: [200224]
        automated match to d2omfa_
        complexed with k, olc, scn
      2. 2627636Domain d3poxb_: 3pox B: [200225]
        automated match to d2omfa_
        complexed with k, olc, scn
      3. 2627637Domain d3poxc_: 3pox C: [195888]
        automated match to d1bt9a_
        complexed with k, olc, scn
      4. 2627638Domain d3poxd_: 3pox D: [200226]
        automated match to d2omfa_
        complexed with k, olc, scn
      5. 2627639Domain d3poxe_: 3pox E: [200227]
        automated match to d2omfa_
        complexed with k, olc, scn
      6. 2627640Domain d3poxf_: 3pox F: [200228]
        automated match to d2omfa_
        complexed with k, olc, scn
    21. Domains for 4gcp:
      1. 2627641Domain d4gcpa_: 4gcp A: [221841]
        automated match to d4gcsa_
        complexed with aic
      2. 2627642Domain d4gcpb_: 4gcp B: [221842]
        automated match to d4gcsa_
        complexed with aic
    22. Domains for 4gcq:
      1. 2627649Domain d4gcqa_: 4gcq A: [221843]
        automated match to d4gcsa_
        complexed with 0jm
      2. 2627650Domain d4gcqb_: 4gcq B: [221844]
        automated match to d4gcsa_
        complexed with 0jm
    23. Domains for 4gcs:
      1. 2627633Domain d4gcsa_: 4gcs A: [193318]
        automated match to d1bt9a_
        complexed with 1rg
      2. 2627634Domain d4gcsb_: 4gcs B: [202236]
        automated match to d4gcsa_
        complexed with 1rg
    24. Domains for 4lse:
      1. 2627658Domain d4lsea_: 4lse A: [228515]
        automated match to d4gcsa_
        complexed with br, c8e, mg, peg
      2. 2627659Domain d4lseb_: 4lse B: [228517]
        automated match to d4gcsa_
        complexed with br, c8e, mg, peg
      3. 2627660Domain d4lsec_: 4lse C: [228516]
        automated match to d4gcsa_
        complexed with br, c8e, mg, peg
    25. Domains for 4lsf:
      1. 2627656Domain d4lsfa_: 4lsf A: [228513]
        automated match to d4gcsa_
        complexed with br, gol
      2. 2627657Domain d4lsfb_: 4lsf B: [228514]
        automated match to d4gcsa_
        complexed with br, gol
    26. Domains for 4lsh:
      1. 2627666Domain d4lsha_: 4lsh A: [228521]
        automated match to d4gcsa_
        complexed with br, mg
      2. 2627667Domain d4lshb_: 4lsh B: [235505]
        automated match to d4lsfa_
        complexed with br, mg
    27. Domains for 4lsi:
      1. 2627652Domain d4lsia_: 4lsi A: [228518]
        automated match to d4gcsa_
        complexed with br, c8e, gol, mg, peg
      2. 2627653Domain d4lsib_: 4lsi B: [228519]
        automated match to d4gcsa_
        complexed with br, c8e, gol, mg, peg
      3. 2627654Domain d4lsic_: 4lsi C: [228520]
        automated match to d4gcsa_
        complexed with br, c8e, gol, mg, peg
    28. Domain for 6zhp:
    29. Domains for 6zhv:
      1. 2627644Domain d6zhva_: 6zhv A: [404365]
        automated match to d2zfga_
        complexed with mg, na, qlb
      2. 2627645Domain d6zhvb_: 6zhv B: [404383]
        automated match to d2zfga_
        complexed with mg, na, qlb
      3. 2627646Domain d6zhvc_: 6zhv C: [404357]
        automated match to d2zfga_
        complexed with mg, na, qlb
  3. 2627685Klebsiella pneumoniae [TaxId:573] [56941] (1 PDB entry)
  4. 2627689Rhodobacter capsulatus [TaxId:1061] [56939] (2 PDB entries)
    1. Domain for 2por:
    2. Domain for 3por:
  5. 2627692Rhodopseudomonas blastica, strain DSM2131 [TaxId:1075] [56940] (9 PDB entries)
    1. Domain for 1bh3:
    2. Domain for 1h6s:
    3. Domain for 1prn:
    4. Domain for 2prn:
    5. Domain for 3prn:
    6. Domain for 5prn:
    7. Domain for 6prn:
    8. Domain for 7prn:
    9. Domain for 8prn:

More info for Protein Porin from f.4.3.1: Porin

Timeline for Protein Porin from f.4.3.1: Porin: