SCOP 1.73: Protein: Rhodopsin

Lineage for Protein: Rhodopsin

Root: SCOP 1.73
Class f: Membrane and cell surface proteins and peptides [56835] (50 folds)
Fold f.13: Family A G protein-coupled receptor-like [81322] (1 superfamily)
core: up-and-down bundle of seven transmembrane helices tilted 20 degrees with respect to the plane of the membrane
Superfamily f.13.1: Family A G protein-coupled receptor-like [81321] (2 families)
Family f.13.1.2: Rhodopsin-like [81320] (1 protein)
Individual TM segments have a number of kinks and distortions
Protein Rhodopsin [56876] (1 species)

Species:

Cow (Bos taurus) [TaxId:9913] [56877] (10 PDB entries)
1. Domains for 1f88:
  1. Domain d1f88a_: 1f88 A: [43429]
  2. Domain d1f88b_: 1f88 B: [43430]
    complexed with hg, man, nag, ret, zn
2. Domains for 1gzm:
  1. Domain d1gzma_: 1gzm A: [90533]
  2. Domain d1gzmb_: 1gzm B: [90534]
    complexed with ace, bma, c8e, lda, nag, pef, plm, ret, zn
3. Domains for 1hzx:
  1. Domain d1hzxa_: 1hzx A: [61466]
  2. Domain d1hzxb_: 1hzx B: [61467]
    complexed with ace, bng, hg, hto, man, nag, ply, ret, zn
4. Domain for 1jfp:
  - Domain d1jfpa_: 1jfp A: [66645]
    dark adapted
    complexed with ret
5. Domains for 1l9h:
  1. Domain d1l9ha_: 1l9h A: [73720]
  2. Domain d1l9hb_: 1l9h B: [73721]
    complexed with ace, bng, hg, hto, man, nag, ply, ret, zn
6. Domain for 1ln6:
  - Domain d1ln6a_: 1ln6 A: [74044]
    complexed with ret
7. Domain for 1tqk:
  - Domain d1tqka_: 1tqk A: [107234]
8. Domains for 1u19:
  1. Domain d1u19a_: 1u19 A: [112953]
  2. Domain d1u19b_: 1u19 B: [112954]
    complexed with ace, hg, htg, hto, man, nag, ply, ret, zn
9. Domains for 2g87:
  1. Domain d2g87a1: 2g87 A:1-348 [134767]
    automatically matched to d1f88a_
    complexed with ace, bma, hg, htg, hto, man, nag, plm, ret, zn
  2. Domain d2g87b1: 2g87 B:1-348 [134768]
    automatically matched to d1f88a_
    complexed with ace, bma, hg, htg, hto, man, nag, plm, ret, zn
10. Domains for 2hpy:
  1. Domain d2hpya1: 2hpy A:1-348 [136653]
    automatically matched to d1f88a_
    complexed with ace, bma, hg, htg, hto, man, nag, plm, ret, zn
  2. Domain d2hpyb1: 2hpy B:1-348 [136654]
    automatically matched to d1f88a_
    complexed with ace, bma, hg, htg, hto, man, nag, plm, ret, zn

More info for Protein Rhodopsin from f.13.1.2: Rhodopsin-like

Timeline for Protein Rhodopsin from f.13.1.2: Rhodopsin-like:

Protein Rhodopsin from f.13.1.2: Rhodopsin-like first appeared (with stable ids) in SCOP 1.55, called Protein Rhodopsin from f.2.1.1: Seven-helix membrane receptors
Protein Rhodopsin from f.13.1.2: Rhodopsin-like appears in SCOP 1.71
Protein Rhodopsin from f.13.1.2: Rhodopsin-like appears in SCOP 1.75
Protein Rhodopsin from f.13.1.2: Rhodopsin-like appears in the current release, SCOPe 2.08