SCOPe 2.07: Family c.108.1.1: HAD-related

Lineage for Family c.108.1.1: HAD-related

1. Root: SCOPe 2.07

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.108: HAD-like [56783] (1 superfamily)
   3 layers: a/b/a; parallel beta-sheet of 6 strands, order 321456

4. Superfamily c.108.1: HAD-like [56784] (26 families)
   usually contains an insertion (sub)domain after strand 1

5. Family c.108.1.1: HAD-related [56785] (3 proteins)
   the insertion subdomain is a 4-helical bundle

Proteins:

1. Hypothetical protein PH0459 [142133] (1 species)

   • Species Pyrococcus horikoshii [TaxId:53953] [142134] (1 PDB entry)
     Uniprot O58216 1-230

2. L-2-Haloacid dehalogenase, HAD [56786] (2 species)

   1. Species Pseudomonas sp., strain YL [TaxId:306] [56787] (4 PDB entries)

   2. Species Xanthobacter autotrophicus [TaxId:280] [56788] (4 PDB entries)

3. automated matches [191260] (1 species)
   not a true protein

   • Species Pyrococcus horikoshii [TaxId:53953] [189820] (7 PDB entries)

More info for Family c.108.1.1: HAD-related

Timeline for Family c.108.1.1: HAD-related:

• Family c.108.1.1: HAD-related first appeared (with stable ids) in SCOP 1.55, called Family e.21.1.1: L-2-Haloacid dehalogenase, HAD
  
• Family c.108.1.1: HAD-related appears in SCOPe 2.06
  
• Family c.108.1.1: HAD-related appears in the current release, SCOPe 2.08