Lineage for Species: Bacteriophage RB69 [TaxId: 12353]

  1. Root: SCOPe 2.01
  2. 1054197Class e: Multi-domain proteins (alpha and beta) [56572] (66 folds)
  3. 1055706Fold e.8: DNA/RNA polymerases [56671] (1 superfamily)
    divided into morphological domains including "palm", "thumb" and "fingers"; the catalytic "palm" domain is conserved to all members
  4. 1055707Superfamily e.8.1: DNA/RNA polymerases [56672] (6 families) (S)
    "palm" domain has a ferredoxin-like fold, related to that of an adenylyl cyclase domain
  5. 1055708Family e.8.1.1: DNA polymerase I [56673] (4 proteins)
  6. 1055785Protein Family B DNA polymerase [56680] (7 species)
  7. 1055786Species Bacteriophage RB69 [TaxId:12353] [56681] (15 PDB entries)

PDB entries in Species: Bacteriophage RB69 [TaxId: 12353]:

  1. Domain(s) for 1clq:
  2. Domain(s) for 1ig9:
  3. Domain(s) for 1ih7:
  4. Domain(s) for 1q9x:
    1. 1055797Domain d1q9xa2: 1q9x A:376-903 [96329]
      Other proteins in same PDB: d1q9xa1, d1q9xb1, d1q9xc1, d1q9xd1
      protein/DNA complex; complexed with 3dr, ca, dgp, doc
    2. 1055798Domain d1q9xb2: 1q9x B:376-903 [96331]
      Other proteins in same PDB: d1q9xa1, d1q9xb1, d1q9xc1, d1q9xd1
      protein/DNA complex; complexed with 3dr, ca, dgp, doc
    3. 1055799Domain d1q9xc2: 1q9x C:376-903 [96333]
      Other proteins in same PDB: d1q9xa1, d1q9xb1, d1q9xc1, d1q9xd1
      protein/DNA complex; complexed with 3dr, ca, dgp, doc
    4. 1055800Domain d1q9xd2: 1q9x D:376-903 [96335]
      Other proteins in same PDB: d1q9xa1, d1q9xb1, d1q9xc1, d1q9xd1
      protein/DNA complex; complexed with 3dr, ca, dgp, doc
  5. Domain(s) for 1q9y:
  6. Domain(s) for 1waf:
    1. 1055815Domain d1wafa2: 1waf A:376-903 [43008]
      Other proteins in same PDB: d1wafa1, d1wafb1
      complexed with gmp
    2. 1055816Domain d1wafb2: 1waf B:376-903 [43009]
      Other proteins in same PDB: d1wafa1, d1wafb1
      complexed with gmp
  7. Domain(s) for 1waj:
  8. Domain(s) for 2atq:
  9. Domain(s) for 2dy4:
    1. 1055790Domain d2dy4a2: 2dy4 A:376-902 [131883]
      Other proteins in same PDB: d2dy4a1, d2dy4b1, d2dy4c1, d2dy4d1
      automatically matched to d1clqa2
      protein/DNA complex
    2. 1055791Domain d2dy4b2: 2dy4 B:376-902 [131885]
      Other proteins in same PDB: d2dy4a1, d2dy4b1, d2dy4c1, d2dy4d1
      automatically matched to d1clqa2
      protein/DNA complex
    3. 1055792Domain d2dy4c2: 2dy4 C:376-900 [131887]
      Other proteins in same PDB: d2dy4a1, d2dy4b1, d2dy4c1, d2dy4d1
      automatically matched to d1clqa2
      protein/DNA complex
    4. 1055793Domain d2dy4d2: 2dy4 D:376-897 [131889]
      Other proteins in same PDB: d2dy4a1, d2dy4b1, d2dy4c1, d2dy4d1
      automatically matched to d1clqa2
      protein/DNA complex
  10. Domain(s) for 2oyq:
    1. 1055807Domain d2oyqa2: 2oyq A:376-903 [149071]
      Other proteins in same PDB: d2oyqa1, d2oyqb1, d2oyqc1, d2oyqd1
      automatically matched to d1clqa2
      protein/DNA complex; complexed with mg, n5p
    2. 1055808Domain d2oyqb2: 2oyq B:376-899 [149073]
      Other proteins in same PDB: d2oyqa1, d2oyqb1, d2oyqc1, d2oyqd1
      automatically matched to d1clqa2
      protein/DNA complex; complexed with mg, n5p
    3. 1055809Domain d2oyqc2: 2oyq C:376-900 [149075]
      Other proteins in same PDB: d2oyqa1, d2oyqb1, d2oyqc1, d2oyqd1
      automatically matched to d1clqa2
      protein/DNA complex; complexed with mg, n5p
    4. 1055810Domain d2oyqd2: 2oyq D:376-898 [149077]
      Other proteins in same PDB: d2oyqa1, d2oyqb1, d2oyqc1, d2oyqd1
      automatically matched to d1clqa2
      protein/DNA complex; complexed with mg, n5p
  11. Domain(s) for 2ozm:
  12. Domain(s) for 2ozs:
  13. Domain(s) for 2p5g:
    1. 1055803Domain d2p5ga2: 2p5g A:376-903 [149241]
      Other proteins in same PDB: d2p5ga1, d2p5gb1, d2p5gc1, d2p5gd1
      automatically matched to d1clqa2
      protein/DNA complex
    2. 1055804Domain d2p5gb2: 2p5g B:376-899 [149243]
      Other proteins in same PDB: d2p5ga1, d2p5gb1, d2p5gc1, d2p5gd1
      automatically matched to d1clqa2
      protein/DNA complex
    3. 1055805Domain d2p5gc2: 2p5g C:376-898 [149245]
      Other proteins in same PDB: d2p5ga1, d2p5gb1, d2p5gc1, d2p5gd1
      automatically matched to d1clqa2
      protein/DNA complex
    4. 1055806Domain d2p5gd2: 2p5g D:376-899 [149247]
      Other proteins in same PDB: d2p5ga1, d2p5gb1, d2p5gc1, d2p5gd1
      automatically matched to d1clqa2
      protein/DNA complex
  14. Domain(s) for 2p5o:
    1. 1055811Domain d2p5oa2: 2p5o A:376-902 [139499]
      Other proteins in same PDB: d2p5oa1, d2p5ob1, d2p5oc1, d2p5od1
      automatically matched to d1clqa2
      protein/DNA complex
    2. 1055812Domain d2p5ob2: 2p5o B:376-901 [139501]
      Other proteins in same PDB: d2p5oa1, d2p5ob1, d2p5oc1, d2p5od1
      automatically matched to d1clqa2
      protein/DNA complex
    3. 1055813Domain d2p5oc2: 2p5o C:376-898 [139503]
      Other proteins in same PDB: d2p5oa1, d2p5ob1, d2p5oc1, d2p5od1
      automatically matched to d1clqa2
      protein/DNA complex
    4. 1055814Domain d2p5od2: 2p5o D:376-896 [139505]
      Other proteins in same PDB: d2p5oa1, d2p5ob1, d2p5oc1, d2p5od1
      automatically matched to d1clqa2
      protein/DNA complex
  15. Domain(s) for 3cq8:

More info for Species Bacteriophage RB69 [TaxId:12353] from e.8.1.1 Family B DNA polymerase

Timeline for Species Bacteriophage RB69 [TaxId:12353] from e.8.1.1 Family B DNA polymerase: