SCOP 1.71: Species: Bacteriophage RB69

Lineage for Species: Bacteriophage RB69

Root: SCOP 1.71
Class e: Multi-domain proteins (alpha and beta) [56572] (48 folds)
Fold e.8: DNA/RNA polymerases [56671] (1 superfamily)
divided into morphological domains including "palm", "thumb" and "fingers"; the catalytic "palm" domain is conserved to all members
Superfamily e.8.1: DNA/RNA polymerases [56672] (6 families)
"palm" domain has a ferredoxin-like fold, related to that of an adenylyl cyclase domain
Family e.8.1.1: DNA polymerase I [56673] (4 proteins)
Protein Family B DNA polymerase [56680] (7 species)
Species Bacteriophage RB69 [TaxId:12353] [56681] (8 PDB entries)

PDB entries in Species: Bacteriophage RB69:

Domain(s) for 1clq:
- Domain d1clqa2: 1clq A:376-903 [43006]
  Other proteins in same PDB: d1clqa1
Domain(s) for 1ig9:
- Domain d1ig9a2: 1ig9 A:376-901 [62368]
  Other proteins in same PDB: d1ig9a1
  complexed with ca, doc, ttp; mutant
Domain(s) for 1ih7:
- Domain d1ih7a2: 1ih7 A:376-903 [62376]
  Other proteins in same PDB: d1ih7a1
  complexed with gmp, k
Domain(s) for 1q9x:
1. Domain d1q9xa2: 1q9x A:376-903 [96329]
  Other proteins in same PDB: d1q9xa1, d1q9xb1, d1q9xc1, d1q9xd1
2. Domain d1q9xb2: 1q9x B:376-903 [96331]
  Other proteins in same PDB: d1q9xa1, d1q9xb1, d1q9xc1, d1q9xd1
3. Domain d1q9xc2: 1q9x C:376-903 [96333]
  Other proteins in same PDB: d1q9xa1, d1q9xb1, d1q9xc1, d1q9xd1
4. Domain d1q9xd2: 1q9x D:376-903 [96335]
  Other proteins in same PDB: d1q9xa1, d1q9xb1, d1q9xc1, d1q9xd1
  complexed with 3dr, ca, dgp, doc; mutant
Domain(s) for 1q9y:
- Domain d1q9ya2: 1q9y A:376-902 [96337]
  Other proteins in same PDB: d1q9ya1
  complexed with 8og, ca, dcp, doc; mutant
Domain(s) for 1rv2:
1. Domain d1rv2a2: 1rv2 A:376-902 [97905]
  Other proteins in same PDB: d1rv2a1, d1rv2b1, d1rv2c1, d1rv2d1
2. Domain d1rv2b2: 1rv2 B:376-901 [97907]
  Other proteins in same PDB: d1rv2a1, d1rv2b1, d1rv2c1, d1rv2d1
3. Domain d1rv2c2: 1rv2 C:376-898 [97909]
  Other proteins in same PDB: d1rv2a1, d1rv2b1, d1rv2c1, d1rv2d1
4. Domain d1rv2d2: 1rv2 D:376-896 [97911]
  Other proteins in same PDB: d1rv2a1, d1rv2b1, d1rv2c1, d1rv2d1
  complexed with 3dr; mutant
Domain(s) for 1waf:
1. Domain d1wafa2: 1waf A:376-903 [43008]
  Other proteins in same PDB: d1wafa1, d1wafb1
2. Domain d1wafb2: 1waf B:376-903 [43009]
  Other proteins in same PDB: d1wafa1, d1wafb1
  complexed with gmp
Domain(s) for 1waj:
- Domain d1waj_2: 1waj 376-903 [43007]
  Other proteins in same PDB: d1waj_1
  complexed with 5gp

More info for Species Bacteriophage RB69 [TaxId:12353] from e.8.1.1 Family B DNA polymerase

Timeline for Species Bacteriophage RB69 [TaxId:12353] from e.8.1.1 Family B DNA polymerase:

Species Bacteriophage RB69 [TaxId:12353] from e.8.1.1 Family B DNA polymerase first appeared (with stable ids) in SCOP 1.55, called Species Bacteriophage RB69 [TaxId:12353] from e.8.1.1 T4-like DNA polymerase
Species Bacteriophage RB69 [TaxId:12353] from e.8.1.1 Family B DNA polymerase appears in SCOP 1.69
Species Bacteriophage RB69 [TaxId:12353] from e.8.1.1 Family B DNA polymerase appears in SCOP 1.73
Species Bacteriophage RB69 [TaxId:12353] from e.8.1.1 Family B DNA polymerase appears in the current release, SCOPe 2.08